Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12434405	0.81[CHB][hapmap];0.85[AMR][1000 genomes]
rs12434618	0.91[CEU][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17110752	0.91[CEU][hapmap];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17110796	0.81[CHB][hapmap]
rs17110799	0.81[CHB][hapmap];0.90[JPT][hapmap]
rs17110880	0.80[JPT][hapmap]
rs1871457	0.80[JPT][hapmap]
rs2122429	0.93[CHB][hapmap];0.91[JPT][hapmap];0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2619671	1.00[CEU][hapmap];0.90[JPT][hapmap];0.85[EUR][1000 genomes]
rs56341421	0.83[ASN][1000 genomes]
rs58877537	0.82[EUR][1000 genomes]
rs7153490	1.00[CEU][hapmap];0.90[JPT][hapmap];0.87[EUR][1000 genomes]
rs7160951	0.93[CHB][hapmap];0.91[JPT][hapmap];0.87[ASN][1000 genomes]
rs72689058	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72689070	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72689071	0.89[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs8013010	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs8017017	0.87[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs8017133	0.93[CHB][hapmap];0.91[JPT][hapmap];0.87[ASN][1000 genomes]
rs8017722	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv902116	chr14:81018237-81082400	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81037000-81051000	Weak transcription	NHEK	skin
2	chr14:81037200-81050800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:81037200-81050800	Weak transcription	HMEC	breast
4	chr14:81043000-81050600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr14:81046400-81053600	Weak transcription	Thymus	Thymus
6	chr14:81046600-81053600	Weak transcription	Dnd41	blood

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