Variant report
Variant | rs58973781 |
---|---|
Chromosome Location | chr12:68353201-68353202 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs28496265 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs2906847 | 1.00[EUR][1000 genomes] |
rs55916709 | 1.00[EUR][1000 genomes] |
rs56131707 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs56215754 | 1.00[EUR][1000 genomes] |
rs57040075 | 0.85[AMR][1000 genomes] |
rs58019545 | 1.00[EUR][1000 genomes] |
rs58123354 | 1.00[EUR][1000 genomes] |
rs58429466 | 1.00[EUR][1000 genomes] |
rs58627876 | 1.00[EUR][1000 genomes] |
rs58918170 | 1.00[EUR][1000 genomes] |
rs59155952 | 1.00[EUR][1000 genomes] |
rs59443438 | 0.82[AFR][1000 genomes] |
rs59781510 | 0.93[AFR][1000 genomes];1.00[EUR][1000 genomes] |
rs60604678 | 0.85[AMR][1000 genomes] |
rs61260239 | 1.00[EUR][1000 genomes] |
rs7294696 | 1.00[EUR][1000 genomes] |
rs7303763 | 1.00[EUR][1000 genomes] |
rs7303859 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73322739 | 1.00[EUR][1000 genomes] |
rs73322745 | 1.00[EUR][1000 genomes] |
rs73322755 | 1.00[EUR][1000 genomes] |
rs73324839 | 1.00[EUR][1000 genomes] |
rs73324848 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73324851 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73324853 | 0.93[AFR][1000 genomes];1.00[EUR][1000 genomes] |
rs73324861 | 0.91[AFR][1000 genomes];1.00[EUR][1000 genomes] |
rs73324869 | 0.93[AFR][1000 genomes] |
rs74099862 | 1.00[EUR][1000 genomes] |
rs74099863 | 1.00[EUR][1000 genomes] |
rs7955966 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7962113 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7964651 | 1.00[EUR][1000 genomes] |
rs7977996 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7980788 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv3411149 | chr12:68066948-68435533 | Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 24 gene(s) | inside rSNPs | diseases |
2 | nsv1039638 | chr12:68293351-68399871 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 15 gene(s) | inside rSNPs | diseases |
3 | nsv899219 | chr12:68293419-68353649 | Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr12:68351400-68356000 | Weak transcription | Psoas Muscle | Psoas |
2 | chr12:68352200-68356200 | Weak transcription | Left Ventricle | heart |