The 2.0 version of rSNPBase

Variant report

Variant rs59013925
Chromosome Location chr1:77660162-77660163
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77616200-77663200 Weak transcription Brain Hippocampus Middle brain
2 chr1:77626000-77662600 Weak transcription Thymus Thymus
3 chr1:77626000-77684200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:77626800-77668000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr1:77626800-77674800 Weak transcription Ovary ovary
6 chr1:77626800-77676200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:77630800-77660600 Weak transcription Left Ventricle heart
8 chr1:77631800-77660600 Weak transcription Primary T cells fromperipheralblood blood
9 chr1:77638200-77662200 Weak transcription Small Intestine intestine
10 chr1:77643400-77669600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr1:77643600-77663000 Weak transcription Brain Inferior Temporal Lobe brain
12 chr1:77643600-77672600 Weak transcription Fetal Lung lung
13 chr1:77643800-77674400 Weak transcription Psoas Muscle Psoas
14 chr1:77645600-77661600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:77646200-77660200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:77648000-77660800 Weak transcription Spleen Spleen
17 chr1:77648400-77684000 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr1:77648800-77661400 Weak transcription Fetal Muscle Trunk muscle
19 chr1:77649000-77679800 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr1:77649200-77672400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:77649600-77666600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr1:77649800-77661200 Weak transcription Pancreas Pancrea
23 chr1:77650200-77660600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:77650800-77668800 Weak transcription Adipose Nuclei Adipose
25 chr1:77650800-77672000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr1:77650800-77684200 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr1:77651000-77660400 Weak transcription Primary hematopoietic stem cells blood
28 chr1:77651000-77662600 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr1:77651200-77663200 Weak transcription Duodenum Mucosa Duodenum
30 chr1:77651200-77668000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:77651800-77660600 Weak transcription Lung lung
32 chr1:77651800-77664800 Weak transcription Gastric stomach
33 chr1:77651800-77665800 Weak transcription Brain Cingulate Gyrus brain
34 chr1:77652000-77662000 Weak transcription Fetal Brain Male brain
35 chr1:77652000-77662400 Weak transcription Right Ventricle heart
36 chr1:77652600-77683400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:77653000-77661800 Weak transcription Stomach Smooth Muscle stomach
38 chr1:77653200-77670800 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr1:77653400-77667800 Weak transcription NHDF-Ad bronchial
40 chr1:77654000-77669600 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr1:77654800-77660600 Weak transcription NHEK skin
42 chr1:77655000-77673400 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr1:77655200-77662400 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr1:77655200-77673000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr1:77655200-77680400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr1:77655200-77684000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:77655400-77662600 Weak transcription Fetal Stomach stomach
48 chr1:77655400-77669000 Weak transcription Fetal Intestine Small intestine
49 chr1:77655600-77683200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr1:77655800-77670800 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015