The 2.0 version of rSNPBase

Variant report

Variant rs59017733
Chromosome Location chr1:214519167-214519168
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214484800-214522000 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:214486200-214526000 Weak transcription Psoas Muscle Psoas
3 chr1:214488200-214520800 Weak transcription Hela-S3 cervix
4 chr1:214493000-214519800 Weak transcription Brain Hippocampus Middle brain
5 chr1:214493000-214534600 Weak transcription Brain Inferior Temporal Lobe brain
6 chr1:214503200-214537800 Weak transcription Gastric stomach
7 chr1:214504600-214533200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:214507000-214529800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr1:214508400-214520000 Weak transcription Thymus Thymus
10 chr1:214508400-214524600 Weak transcription Lung lung
11 chr1:214508400-214524800 Weak transcription Spleen Spleen
12 chr1:214508400-214529600 Weak transcription Pancreas Pancrea
13 chr1:214508400-214535000 Weak transcription Esophagus oesophagus
14 chr1:214508800-214520400 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr1:214508800-214528600 Weak transcription Fetal Intestine Large intestine
16 chr1:214509200-214523200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:214511400-214524800 Weak transcription Right Ventricle heart
18 chr1:214511400-214529400 Weak transcription Aorta Aorta
19 chr1:214511400-214530400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr1:214511400-214531200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr1:214511600-214522400 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr1:214511600-214528000 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr1:214511800-214528000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:214512000-214520200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr1:214512000-214521600 Weak transcription H9 Cell Line embryonic stem cell
26 chr1:214512000-214537000 Weak transcription Rectal Smooth Muscle rectum
27 chr1:214512400-214520800 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr1:214512400-214524600 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr1:214512600-214520400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr1:214513000-214519800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr1:214513600-214552200 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr1:214514000-214522600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:214514000-214523200 Strong transcription Osteobl bone
34 chr1:214514000-214537800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:214514400-214523000 Weak transcription Placenta Amnion Placenta Amnion
36 chr1:214514600-214523200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr1:214514800-214526400 Weak transcription Fetal Stomach stomach
38 chr1:214515200-214520000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr1:214515400-214542600 Weak transcription Brain Substantia Nigra brain
40 chr1:214515800-214522400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr1:214516000-214522200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr1:214516000-214523200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:214516200-214522800 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr1:214516400-214519200 Strong transcription HUES6 Cell Line embryonic stem cell
45 chr1:214516400-214522600 Strong transcription HSMM muscle
46 chr1:214517000-214519200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
47 chr1:214517000-214521400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:214517200-214521800 Strong transcription NHDF-Ad bronchial
49 chr1:214517200-214522200 Strong transcription Fetal Adrenal Gland Adrenal Gland
50 chr1:214517400-214520400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015