Variant report

Variant	rs59033491
Chromosome Location	chr4:147852525-147852526
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr4:147852491-147852569	MCF10A-Er-Src	breast:	n/a	n/a

Variant related genes	Relation type
ENSG00000248764	TF binding region

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10519843	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10519858	1.00[EUR][1000 genomes]
rs1370302	1.00[EUR][1000 genomes]
rs1437260	1.00[EUR][1000 genomes]
rs17022075	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17022182	1.00[EUR][1000 genomes]
rs17022229	1.00[EUR][1000 genomes]
rs17022275	1.00[EUR][1000 genomes]
rs17022292	1.00[EUR][1000 genomes]
rs28694531	1.00[EUR][1000 genomes]
rs4301138	1.00[EUR][1000 genomes]
rs55789811	1.00[EUR][1000 genomes]
rs55862662	1.00[EUR][1000 genomes]
rs56919404	1.00[EUR][1000 genomes]
rs56939845	1.00[EUR][1000 genomes]
rs59895059	1.00[EUR][1000 genomes]
rs60507236	0.99[AFR][1000 genomes]
rs6537442	1.00[EUR][1000 genomes]
rs6811983	1.00[EUR][1000 genomes]
rs6813219	1.00[EUR][1000 genomes]
rs6840129	1.00[EUR][1000 genomes]
rs6850704	1.00[EUR][1000 genomes]
rs6851748	1.00[EUR][1000 genomes]
rs6857268	1.00[EUR][1000 genomes]
rs73852704	1.00[EUR][1000 genomes]
rs73852707	1.00[EUR][1000 genomes]
rs73852718	1.00[EUR][1000 genomes]
rs73852721	1.00[EUR][1000 genomes]
rs73852722	1.00[EUR][1000 genomes]
rs73852734	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73852736	1.00[EUR][1000 genomes]
rs73852787	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73852788	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73852789	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73852790	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73852791	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73852795	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73852796	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73852797	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73853258	0.99[AFR][1000 genomes]
rs73853259	1.00[EUR][1000 genomes]
rs73853275	1.00[EUR][1000 genomes]
rs73853277	1.00[EUR][1000 genomes]
rs73853283	1.00[EUR][1000 genomes]
rs73853285	1.00[EUR][1000 genomes]
rs73853295	1.00[EUR][1000 genomes]
rs73855101	0.99[AFR][1000 genomes]
rs73855102	1.00[EUR][1000 genomes]
rs73855650	1.00[EUR][1000 genomes]
rs73856354	1.00[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:147849400-147853200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr4:147851600-147853600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr4:147851800-147853400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr4:147852200-147853600	Enhancers	Primary hematopoietic stem cells	blood
5	chr4:147852200-147853600	Enhancers	Primary hematopoietic stem cells short term culture	blood

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