The 2.0 version of rSNPBase

Variant report

Variant rs59149007
Chromosome Location chr2:209222214-209222215
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:209147400-209225600 Weak transcription Stomach Mucosa stomach
2 chr2:209180600-209224600 Strong transcription Fetal Thymus thymus
3 chr2:209182400-209224200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr2:209185600-209224000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr2:209188400-209223400 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr2:209188800-209222400 Strong transcription Primary T helper cells fromperipheralblood blood
7 chr2:209188800-209222600 Strong transcription HUES6 Cell Line embryonic stem cell
8 chr2:209188800-209223600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr2:209188800-209223800 Strong transcription Primary monocytes fromperipheralblood blood
10 chr2:209188800-209224000 Strong transcription Primary B cells from cord blood blood
11 chr2:209188800-209224000 Strong transcription Primary hematopoietic stem cells blood
12 chr2:209188800-209224200 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr2:209188800-209224400 Strong transcription Dnd41 blood
14 chr2:209190600-209224200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr2:209191200-209224200 Strong transcription Primary B cells from peripheral blood blood
16 chr2:209195400-209223800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr2:209198000-209224600 Strong transcription Primary hematopoietic stem cells short term culture blood
18 chr2:209205400-209223600 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr2:209206600-209223800 Weak transcription Psoas Muscle Psoas
20 chr2:209206600-209224200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr2:209206600-209225400 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr2:209212000-209223600 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr2:209215000-209225400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr2:209215200-209223800 Strong transcription GM12878-XiMat blood
25 chr2:209215200-209224400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr2:209215400-209224400 Strong transcription Primary T cells from cord blood blood
27 chr2:209216800-209225000 Weak transcription Spleen Spleen
28 chr2:209216800-209226800 Weak transcription Brain Germinal Matrix brain
29 chr2:209217000-209223800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr2:209217000-209224200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr2:209217000-209225800 Weak transcription Lung lung
32 chr2:209217200-209223600 Weak transcription Fetal Stomach stomach
33 chr2:209217200-209225000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr2:209218800-209225400 Weak transcription Fetal Brain Male brain
35 chr2:209219400-209225200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr2:209219400-209228000 Weak transcription Hela-S3 cervix
37 chr2:209220000-209227600 Weak transcription Stomach Smooth Muscle stomach
38 chr2:209220000-209228000 Weak transcription NHEK skin
39 chr2:209220200-209222400 Weak transcription Ovary ovary
40 chr2:209220200-209222800 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr2:209220200-209223400 Weak transcription Brain Angular Gyrus brain
42 chr2:209220200-209223600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr2:209220200-209223600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr2:209220200-209223600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr2:209220200-209223600 Weak transcription Fetal Heart heart
46 chr2:209220200-209223600 Weak transcription Fetal Intestine Small intestine
47 chr2:209220200-209223600 Weak transcription Fetal Muscle Leg muscle
48 chr2:209220200-209223600 Weak transcription Thymus Thymus
49 chr2:209220200-209223800 Weak transcription Brain Inferior Temporal Lobe brain
50 chr2:209220200-209224400 Weak transcription Colonic Mucosa Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015