Variant report

Variant	rs59268208
Chromosome Location	chr3:42744430-42744431
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:42737037..42739602-chr3:42741625..42745097,3	K562	blood:
2	chr3:42724857..42728583-chr3:42742957..42746730,4	K562	blood:

Variant related genes	Relation type
ENSG00000157119	Chromatin interaction
ENSG00000010282	Chromatin interaction

rs_ID	r²[population]
rs17842066	1.00[EUR][1000 genomes]
rs28544555	1.00[EUR][1000 genomes]
rs3732859	1.00[EUR][1000 genomes]
rs57205235	1.00[EUR][1000 genomes]
rs57780787	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:42739200-42751800	Weak transcription	Pancreas	Pancrea
2	chr3:42742000-42744800	Flanking Active TSS	Brain Hippocampus Middle	brain
3	chr3:42742000-42745000	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
4	chr3:42742400-42744800	Flanking Active TSS	Brain Cingulate Gyrus	brain
5	chr3:42742800-42745000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr3:42743000-42744800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr3:42743000-42745000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
8	chr3:42743000-42746000	Weak transcription	Spleen	Spleen
9	chr3:42743400-42744800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
10	chr3:42744000-42744800	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
11	chr3:42744000-42745400	Weak transcription	Psoas Muscle	Psoas
12	chr3:42744000-42746600	Enhancers	Fetal Heart	heart
13	chr3:42744200-42744600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr3:42744200-42744800	Enhancers	Right Atrium	heart
15	chr3:42744200-42745400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
16	chr3:42744200-42746200	Enhancers	Brain Anterior Caudate	brain
17	chr3:42744200-42748600	Enhancers	Fetal Muscle Leg	muscle
18	chr3:42744400-42744600	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr3:42744400-42744600	Flanking Active TSS	Brain Substantia Nigra	brain
20	chr3:42744400-42744600	Enhancers	Fetal Muscle Trunk	muscle
21	chr3:42744400-42744800	Enhancers	iPS-15b Cell Line	embryonic stem cell
22	chr3:42744400-42745000	Flanking Active TSS	Brain Angular Gyrus	brain
23	chr3:42744400-42745000	Enhancers	Left Ventricle	heart
24	chr3:42744400-42745000	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
25	chr3:42744400-42745000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
26	chr3:42744400-42747800	Enhancers	Right Ventricle	heart

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