Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:42904072..42907303-chr3:42909890..42911615,3	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10490793	1.00[CEU][hapmap]
rs12633357	0.81[AMR][1000 genomes]
rs12637438	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12638233	1.00[CEU][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes]
rs1346414	1.00[JPT][hapmap]
rs1427800	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs1427802	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs17074839	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17842066	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1863883	0.81[AMR][1000 genomes]
rs1863884	0.90[AMR][1000 genomes]
rs1875129	1.00[CEU][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes]
rs2081810	0.81[AMR][1000 genomes]
rs28544555	1.00[EUR][1000 genomes]
rs2888273	0.81[AMR][1000 genomes]
rs4146792	1.00[CEU][hapmap]
rs4515028	0.81[ASN][1000 genomes]
rs56970966	0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs57205235	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs57780787	1.00[EUR][1000 genomes]
rs59268208	1.00[EUR][1000 genomes]
rs6442121	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs72499008	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3429579	chr3:42898402-42907671	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:42894800-42912800	Weak transcription	Right Atrium	heart
2	chr3:42897800-42913400	Weak transcription	Pancreas	Pancrea
3	chr3:42905600-42912800	Strong transcription	Placenta	Placenta
4	chr3:42905800-42907000	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr3:42906000-42906800	Strong transcription	Placenta Amnion	Placenta Amnion
6	chr3:42906000-42907800	Weak transcription	Liver	Liver
7	chr3:42906200-42907000	Active TSS	Brain Substantia Nigra	brain

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