The 2.0 version of rSNPBase

Variant report

Variant rs59326616
Chromosome Location chr7:129520505-129520506
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:129475000-129534800 Weak transcription Colonic Mucosa Colon
2 chr7:129479400-129543600 Weak transcription Thymus Thymus
3 chr7:129497000-129536800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr7:129503200-129529000 Weak transcription Gastric stomach
5 chr7:129503400-129538400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr7:129505600-129529600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr7:129505600-129545600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr7:129506000-129542800 Weak transcription Small Intestine intestine
9 chr7:129506800-129520600 Weak transcription Fetal Kidney kidney
10 chr7:129509600-129541000 Weak transcription Spleen Spleen
11 chr7:129510200-129524600 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr7:129510600-129541000 Weak transcription Esophagus oesophagus
13 chr7:129511200-129529000 Weak transcription Brain Germinal Matrix brain
14 chr7:129511200-129529600 Weak transcription Brain Substantia Nigra brain
15 chr7:129512000-129524400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr7:129512000-129529600 Weak transcription Fetal Stomach stomach
17 chr7:129513200-129548600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr7:129513800-129529600 Weak transcription Fetal Intestine Small intestine
19 chr7:129515600-129520800 Strong transcription Breast Myoepithelial Primary Cells Breast
20 chr7:129515600-129521000 Strong transcription Primary B cells from peripheral blood blood
21 chr7:129515600-129521000 Enhancers Primary T helper 17 cells PMA-I stimulated --
22 chr7:129515600-129521000 Strong transcription GM12878-XiMat blood
23 chr7:129515800-129520800 Strong transcription Placenta Placenta
24 chr7:129515800-129521800 Strong transcription Primary B cells from cord blood blood
25 chr7:129516000-129529400 Weak transcription Placenta Amnion Placenta Amnion
26 chr7:129516200-129521600 Weak transcription H9 Cell Line embryonic stem cell
27 chr7:129516200-129521800 Weak transcription NHDF-Ad bronchial
28 chr7:129516200-129525400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr7:129516200-129526000 Weak transcription NHLF lung
30 chr7:129516200-129526200 Weak transcription Ovary ovary
31 chr7:129516200-129529000 Weak transcription Aorta Aorta
32 chr7:129516200-129529000 Weak transcription Stomach Smooth Muscle stomach
33 chr7:129516200-129542800 Weak transcription HSMMtube muscle
34 chr7:129516200-129584400 Weak transcription Fetal Brain Male brain
35 chr7:129516400-129528000 Weak transcription Rectal Smooth Muscle rectum
36 chr7:129516600-129528800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr7:129516800-129521000 Strong transcription HSMM muscle
38 chr7:129517000-129520800 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr7:129517000-129521000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr7:129517200-129520800 Strong transcription Cortex derived primary cultured neurospheres brain
41 chr7:129517200-129520800 Strong transcription Rectal Mucosa Donor 31 rectum
42 chr7:129517200-129529200 Weak transcription Fetal Lung lung
43 chr7:129517400-129543800 Weak transcription Primary hematopoietic stem cells blood
44 chr7:129517800-129520800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr7:129517800-129520800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr7:129518000-129520800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr7:129518000-129529000 Weak transcription Brain Inferior Temporal Lobe brain
48 chr7:129518000-129537200 Weak transcription Brain Angular Gyrus brain
49 chr7:129518000-129537200 Weak transcription Brain Cingulate Gyrus brain
50 chr7:129518000-129545200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015