Variant report

Variant rs59342331
Chromosome Location chr11:46928168-46928169
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46896600-46928200 Weak transcription Fetal Heart heart
2 chr11:46911200-46933800 Weak transcription Fetal Kidney kidney
3 chr11:46917800-46934000 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr11:46917800-46934000 Weak transcription NHLF lung
5 chr11:46918800-46934000 Weak transcription Colonic Mucosa Colon
6 chr11:46920400-46928400 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr11:46921200-46928400 Weak transcription Fetal Brain Female brain
8 chr11:46921600-46933800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr11:46921600-46933800 Weak transcription NHEK skin
10 chr11:46921600-46934000 Weak transcription Rectal Smooth Muscle rectum
11 chr11:46921600-46934200 Weak transcription Esophagus oesophagus
12 chr11:46921600-46936000 Weak transcription Pancreas Pancrea
13 chr11:46921600-46936000 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr11:46921800-46934000 Weak transcription Fetal Intestine Large intestine
15 chr11:46921800-46938400 Weak transcription Gastric stomach
16 chr11:46922000-46928200 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr11:46922000-46928400 Weak transcription H9 Cell Line embryonic stem cell
18 chr11:46922000-46928400 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr11:46922200-46934000 Weak transcription Duodenum Mucosa Duodenum
20 chr11:46922200-46934000 Weak transcription Fetal Intestine Small intestine
21 chr11:46923000-46933800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr11:46923200-46928200 Weak transcription Stomach Smooth Muscle stomach
23 chr11:46924000-46929400 Enhancers Brain Anterior Caudate brain
24 chr11:46924200-46929200 Enhancers Brain Angular Gyrus brain
25 chr11:46924200-46929400 Enhancers Brain Substantia Nigra brain
26 chr11:46924600-46930000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr11:46924800-46928800 Enhancers Fetal Muscle Leg muscle
28 chr11:46925200-46929000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
29 chr11:46925600-46929400 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr11:46926000-46928400 Weak transcription Brain Germinal Matrix brain
31 chr11:46926000-46928800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
32 chr11:46926000-46932000 Weak transcription Psoas Muscle Psoas
33 chr11:46926000-46934000 Weak transcription Fetal Brain Male brain
34 chr11:46926200-46928600 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr11:46926200-46929200 Enhancers Brain Cingulate Gyrus brain
36 chr11:46926200-46932800 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr11:46926400-46928200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr11:46926400-46928400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr11:46926400-46934000 Weak transcription Right Atrium heart
40 chr11:46926400-46934000 Weak transcription Right Ventricle heart
41 chr11:46926800-46928200 Weak transcription Left Ventricle heart
42 chr11:46926800-46928800 Enhancers Fetal Adrenal Gland Adrenal Gland
43 chr11:46927000-46928200 Weak transcription H1 Cell Line embryonic stem cell
44 chr11:46927400-46928400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
45 chr11:46927400-46928600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
46 chr11:46927400-46928800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr11:46927400-46929200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr11:46927600-46929200 Enhancers Brain Inferior Temporal Lobe brain
49 chr11:46927600-46932200 Enhancers Cortex derived primary cultured neurospheres brain
50 chr11:46927800-46928400 Enhancers NH-A brain

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