The 2.0 version of rSNPBase

Variant report

Variant rs7928628
Chromosome Location chr11:46878430-46878431
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46868000-46909000 Weak transcription Small Intestine intestine
2 chr11:46868200-46879600 Weak transcription Left Ventricle heart
3 chr11:46868200-46880000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr11:46868400-46878600 Weak transcription HSMMtube muscle
5 chr11:46868400-46878800 Weak transcription Right Ventricle heart
6 chr11:46868400-46879200 Weak transcription Fetal Kidney kidney
7 chr11:46868400-46879400 Weak transcription Brain Substantia Nigra brain
8 chr11:46868400-46879600 Weak transcription Fetal Intestine Large intestine
9 chr11:46868400-46879800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr11:46868400-46880200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr11:46868400-46880400 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr11:46868400-46884200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr11:46868600-46879200 Weak transcription Brain Cingulate Gyrus brain
14 chr11:46868600-46879200 Weak transcription Brain Inferior Temporal Lobe brain
15 chr11:46868600-46879400 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr11:46868600-46879600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr11:46868600-46879800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr11:46868600-46879800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr11:46868600-46879800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr11:46868600-46879800 Weak transcription Stomach Smooth Muscle stomach
21 chr11:46868600-46880000 Weak transcription Brain Angular Gyrus brain
22 chr11:46868600-46880000 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr11:46868600-46880000 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr11:46868600-46885400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr11:46868600-46894400 Weak transcription HMEC breast
26 chr11:46868600-46895200 Weak transcription Fetal Heart heart
27 chr11:46868600-46917400 Weak transcription Fetal Brain Male brain
28 chr11:46868800-46879600 Weak transcription Fetal Brain Female brain
29 chr11:46868800-46879800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr11:46868800-46884200 Weak transcription NHEK skin
31 chr11:46868800-46913000 Weak transcription A549 lung
32 chr11:46869000-46879800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr11:46869000-46879800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr11:46869000-46880200 Weak transcription Brain Germinal Matrix brain
35 chr11:46869000-46886800 Weak transcription NHDF-Ad bronchial
36 chr11:46872600-46880400 Weak transcription Esophagus oesophagus
37 chr11:46873400-46879800 Weak transcription H9 Cell Line embryonic stem cell
38 chr11:46873400-46879800 Weak transcription Spleen Spleen
39 chr11:46873400-46882200 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr11:46873600-46879800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr11:46874200-46880000 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr11:46875400-46879800 Weak transcription Fetal Intestine Small intestine
43 chr11:46875600-46879400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr11:46875600-46917200 Strong transcription Cortex derived primary cultured neurospheres brain
45 chr11:46875800-46880000 Weak transcription Placenta Placenta
46 chr11:46876000-46905200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr11:46876200-46879200 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr11:46876200-46880600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr11:46876200-46894600 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr11:46876600-46889400 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015