Variant report

Variant	rs59343472
Chromosome Location	chr4:127981402-127981403
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10024723	1.00[EUR][1000 genomes]
rs17011773	1.00[EUR][1000 genomes]
rs2391123	1.00[EUR][1000 genomes]
rs55689516	1.00[EUR][1000 genomes]
rs56973979	1.00[EUR][1000 genomes]
rs57849919	1.00[EUR][1000 genomes]
rs58161517	1.00[EUR][1000 genomes]
rs58363144	1.00[EUR][1000 genomes]
rs59433376	1.00[EUR][1000 genomes]
rs59613428	1.00[EUR][1000 genomes]
rs6824490	1.00[EUR][1000 genomes]
rs6853384	1.00[EUR][1000 genomes]
rs72925395	1.00[EUR][1000 genomes]
rs72927205	1.00[EUR][1000 genomes]
rs72927207	1.00[EUR][1000 genomes]
rs72927209	1.00[EUR][1000 genomes]
rs72927220	1.00[EUR][1000 genomes]
rs72927222	1.00[EUR][1000 genomes]
rs72927226	1.00[EUR][1000 genomes]
rs72927229	1.00[EUR][1000 genomes]
rs72927267	1.00[EUR][1000 genomes]
rs73848023	1.00[EUR][1000 genomes]
rs73848029	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7681026	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830055	chr4:127794875-127993821	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127967600-127982000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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