Variant report

Variant	rs7681026
Chromosome Location	chr4:128103944-128103945
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10001724	1.00[AMR][1000 genomes]
rs10004199	1.00[AMR][1000 genomes]
rs10010455	1.00[AMR][1000 genomes]
rs10015453	1.00[AMR][1000 genomes]
rs10023151	0.83[AFR][1000 genomes]
rs10029556	1.00[AMR][1000 genomes]
rs10034583	1.00[AMR][1000 genomes]
rs1031943	0.83[AFR][1000 genomes]
rs11931739	0.87[AMR][1000 genomes]
rs11932977	1.00[EUR][1000 genomes]
rs12511473	0.97[AFR][1000 genomes]
rs13107744	0.86[AFR][1000 genomes]
rs1351427	1.00[AMR][1000 genomes]
rs1383517	0.87[AFR][1000 genomes]
rs1480911	0.97[AFR][1000 genomes]
rs1531685	0.97[AFR][1000 genomes]
rs17012003	1.00[AMR][1000 genomes]
rs28433391	1.00[AMR][1000 genomes]
rs28436662	1.00[AMR][1000 genomes]
rs28649494	1.00[AMR][1000 genomes]
rs28707514	1.00[AMR][1000 genomes]
rs28852774	1.00[AMR][1000 genomes]
rs56973979	1.00[EUR][1000 genomes]
rs57771518	1.00[EUR][1000 genomes]
rs57849919	1.00[EUR][1000 genomes]
rs58161517	1.00[EUR][1000 genomes]
rs58426264	1.00[EUR][1000 genomes]
rs58881560	1.00[EUR][1000 genomes]
rs59343472	1.00[EUR][1000 genomes]
rs59433376	1.00[EUR][1000 genomes]
rs59500126	1.00[AMR][1000 genomes]
rs59613428	1.00[EUR][1000 genomes]
rs60860464	1.00[EUR][1000 genomes]
rs6824490	1.00[EUR][1000 genomes]
rs6838622	1.00[AMR][1000 genomes]
rs6841506	0.82[AFR][1000 genomes]
rs6852817	0.83[AFR][1000 genomes]
rs6853384	1.00[EUR][1000 genomes]
rs72925395	1.00[EUR][1000 genomes]
rs72927205	1.00[EUR][1000 genomes]
rs72927207	1.00[EUR][1000 genomes]
rs72927209	1.00[EUR][1000 genomes]
rs72927220	1.00[EUR][1000 genomes]
rs72927222	1.00[EUR][1000 genomes]
rs72927226	1.00[EUR][1000 genomes]
rs72927229	1.00[EUR][1000 genomes]
rs72927267	1.00[EUR][1000 genomes]
rs73848039	1.00[AMR][1000 genomes]
rs7665728	1.00[AMR][1000 genomes]
rs9992535	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879914	chr4:128005362-128123638	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128102200-128104400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr4:128102800-128104400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr4:128102800-128104400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr4:128103600-128104000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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