Variant report

Variant	rs6824490
Chromosome Location	chr4:128135324-128135325
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:128134410..128136138-chr4:128138981..128141973,2	K562	blood:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10518520	0.94[AFR][1000 genomes]
rs11932977	1.00[EUR][1000 genomes]
rs4264845	1.00[EUR][1000 genomes]
rs4368619	1.00[EUR][1000 genomes]
rs4833375	1.00[EUR][1000 genomes]
rs56786523	0.94[AFR][1000 genomes]
rs56973979	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57771518	1.00[EUR][1000 genomes]
rs57849919	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58161517	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58426264	1.00[EUR][1000 genomes]
rs58881560	1.00[EUR][1000 genomes]
rs59343472	1.00[EUR][1000 genomes]
rs59433376	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59613428	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60860464	1.00[EUR][1000 genomes]
rs6823062	1.00[EUR][1000 genomes]
rs6833784	1.00[EUR][1000 genomes]
rs6853384	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72925395	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72927205	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72927207	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72927209	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72927220	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72927222	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72927226	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72927229	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72927254	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72927267	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7681026	1.00[EUR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128131400-128135600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr4:128131600-128136200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr4:128132400-128135400	Weak transcription	Stomach Smooth Muscle	stomach
4	chr4:128133200-128138000	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr4:128133800-128135600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr4:128134000-128135400	Weak transcription	Ovary	ovary
7	chr4:128134200-128135400	Weak transcription	Osteobl	bone
8	chr4:128135000-128135400	Enhancers	Aorta	Aorta
9	chr4:128135000-128135400	Enhancers	Skeletal Muscle Male	skeletal muscle
10	chr4:128135000-128135800	Enhancers	Adipose Nuclei	Adipose
11	chr4:128135000-128135800	Enhancers	Fetal Lung	lung
12	chr4:128135200-128135400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr4:128135200-128135600	Enhancers	Fetal Muscle Leg	muscle
14	chr4:128135200-128135600	Enhancers	Right Atrium	heart
15	chr4:128135200-128135600	Enhancers	Spleen	Spleen
16	chr4:128135200-128135800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
17	chr4:128135200-128135800	Enhancers	Fetal Stomach	stomach

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