Variant report

Variant	rs1031943
Chromosome Location	chr4:128002795-128002796
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10002403	1.00[ASN][1000 genomes]
rs10010552	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10023151	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10029217	1.00[ASN][1000 genomes]
rs11098912	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1155135	0.81[EUR][1000 genomes]
rs11937459	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12511473	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13107744	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13125153	1.00[ASN][1000 genomes]
rs1372967	1.00[ASN][1000 genomes]
rs1383517	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1383519	1.00[ASN][1000 genomes]
rs1383522	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480901	1.00[ASN][1000 genomes]
rs1480902	1.00[ASN][1000 genomes]
rs1480907	1.00[ASN][1000 genomes]
rs1480908	1.00[ASN][1000 genomes]
rs1480911	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480913	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1531684	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1531685	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2054560	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2127816	1.00[ASN][1000 genomes]
rs2170268	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3106205	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs340443	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs340450	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4240280	1.00[ASN][1000 genomes]
rs4336239	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4365744	1.00[ASN][1000 genomes]
rs4833371	1.00[ASN][1000 genomes]
rs4834182	1.00[ASN][1000 genomes]
rs4834183	1.00[ASN][1000 genomes]
rs4834185	1.00[ASN][1000 genomes]
rs4834187	1.00[ASN][1000 genomes]
rs6534599	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6841506	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6844804	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6852817	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7664962	1.00[ASN][1000 genomes]
rs7668919	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7674918	1.00[ASN][1000 genomes]
rs7681026	0.83[AFR][1000 genomes]
rs7691994	1.00[ASN][1000 genomes]
rs7692034	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3353295	chr4:127994396-128017617	Enhancers Weak transcription ZNF genes & repeats	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128001800-128004200	Weak transcription	Fetal Lung	lung
2	chr4:128002600-128003400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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