Variant report

Variant	rs1383519
Chromosome Location	chr4:128125357-128125358
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 49 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs10002403	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10010552	1.00[ASN][1000 genomes]
rs10023151	1.00[ASN][1000 genomes]
rs10029217	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1031943	1.00[ASN][1000 genomes]
rs11098912	1.00[ASN][1000 genomes]
rs11937459	1.00[ASN][1000 genomes]
rs12499503	0.83[EUR][1000 genomes]
rs12511473	1.00[ASN][1000 genomes]
rs13107744	1.00[ASN][1000 genomes]
rs13111334	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13125153	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1372967	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1383517	1.00[ASN][1000 genomes]
rs1383518	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1383522	1.00[ASN][1000 genomes]
rs1480901	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480902	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480907	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480908	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480911	1.00[ASN][1000 genomes]
rs1480913	1.00[ASN][1000 genomes]
rs1531684	1.00[ASN][1000 genomes]
rs1531685	1.00[ASN][1000 genomes]
rs2054560	1.00[ASN][1000 genomes]
rs2083754	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2127816	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2170268	1.00[ASN][1000 genomes]
rs3106205	1.00[ASN][1000 genomes]
rs340443	1.00[ASN][1000 genomes]
rs340450	1.00[ASN][1000 genomes]
rs4240280	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4336239	1.00[ASN][1000 genomes]
rs4365744	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4833371	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4834182	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4834183	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4834185	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4834187	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6534599	1.00[ASN][1000 genomes]
rs6534612	1.00[ASN][1000 genomes]
rs6841506	1.00[ASN][1000 genomes]
rs6844804	1.00[ASN][1000 genomes]
rs6852817	1.00[ASN][1000 genomes]
rs7664962	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7668919	1.00[ASN][1000 genomes]
rs7674918	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7691994	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7692034	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128124200-128126200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr4:128124600-128125400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr4:128124600-128125400	Enhancers	HMEC	breast
4	chr4:128124600-128125400	Enhancers	HSMM	muscle
5	chr4:128124600-128125800	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr4:128124600-128125800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr4:128124800-128125400	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr4:128124800-128125600	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr4:128124800-128125600	Enhancers	iPS-20b Cell Line	embryonic stem cell
10	chr4:128124800-128125600	Enhancers	Muscle Satellite Cultured Cells	--
11	chr4:128124800-128125800	Enhancers	iPS-15b Cell Line	embryonic stem cell
12	chr4:128124800-128126200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr4:128125000-128125400	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr4:128125000-128125400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr4:128125000-128125800	Enhancers	H9 Cell Line	embryonic stem cell
16	chr4:128125000-128125800	Enhancers	Osteobl	bone
17	chr4:128125000-128126000	Enhancers	HUES48 Cell Line	embryonic stem cell
18	chr4:128125000-128126000	Enhancers	NHDF-Ad	bronchial
19	chr4:128125200-128125400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr4:128125200-128125400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr4:128125200-128125800	Enhancers	H1 Cell Line	embryonic stem cell
22	chr4:128125200-128125800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
23	chr4:128125200-128125800	Enhancers	Fetal Muscle Leg	muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links