Variant report

Variant	rs1480901
Chromosome Location	chr4:128124694-128124695
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 49 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs10002403	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10010552	1.00[ASN][1000 genomes]
rs10023151	1.00[ASN][1000 genomes]
rs10029217	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1031943	1.00[ASN][1000 genomes]
rs11098912	1.00[ASN][1000 genomes]
rs11937459	1.00[ASN][1000 genomes]
rs12499503	0.82[EUR][1000 genomes]
rs12511473	1.00[ASN][1000 genomes]
rs13107744	1.00[ASN][1000 genomes]
rs13111334	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13125153	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1372967	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1383517	1.00[ASN][1000 genomes]
rs1383518	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1383519	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1383522	1.00[ASN][1000 genomes]
rs1480902	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480907	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480908	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480911	1.00[ASN][1000 genomes]
rs1480913	1.00[ASN][1000 genomes]
rs1531684	1.00[ASN][1000 genomes]
rs1531685	1.00[ASN][1000 genomes]
rs2054560	1.00[ASN][1000 genomes]
rs2083754	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2127816	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2170268	1.00[ASN][1000 genomes]
rs3106205	1.00[ASN][1000 genomes]
rs340443	1.00[ASN][1000 genomes]
rs340450	1.00[ASN][1000 genomes]
rs4240280	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4336239	1.00[ASN][1000 genomes]
rs4365744	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4833371	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4834182	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4834183	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4834185	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4834187	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6534599	1.00[ASN][1000 genomes]
rs6534612	1.00[ASN][1000 genomes]
rs6841506	1.00[ASN][1000 genomes]
rs6844804	1.00[ASN][1000 genomes]
rs6852817	1.00[ASN][1000 genomes]
rs7664962	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7668919	1.00[ASN][1000 genomes]
rs7674918	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7691994	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7692034	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128123000-128125000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr4:128124200-128126200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr4:128124400-128125000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr4:128124600-128125200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr4:128124600-128125400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr4:128124600-128125400	Enhancers	HMEC	breast
7	chr4:128124600-128125400	Enhancers	HSMM	muscle
8	chr4:128124600-128125800	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr4:128124600-128125800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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