Variant report

Variant	rs7674918
Chromosome Location	chr4:128157629-128157630
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:128156891..128158963-chr4:128159166..128161627,2	K562	blood:

Extended variants
information (count: 57 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:56)

rs_ID	r²[population]
rs10002403	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10010552	1.00[ASN][1000 genomes]
rs10023151	1.00[ASN][1000 genomes]
rs10029217	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1031943	1.00[ASN][1000 genomes]
rs11098912	1.00[ASN][1000 genomes]
rs11937459	1.00[ASN][1000 genomes]
rs12499503	0.86[EUR][1000 genomes]
rs12511473	1.00[ASN][1000 genomes]
rs13107744	1.00[ASN][1000 genomes]
rs13111334	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13125153	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1372967	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1383517	1.00[ASN][1000 genomes]
rs1383518	0.93[EUR][1000 genomes]
rs1383519	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1383522	1.00[ASN][1000 genomes]
rs1480901	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480902	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480907	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480908	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480911	1.00[ASN][1000 genomes]
rs1480913	1.00[ASN][1000 genomes]
rs1531684	1.00[ASN][1000 genomes]
rs1531685	1.00[ASN][1000 genomes]
rs17012435	1.00[ASN][1000 genomes]
rs17012441	1.00[ASN][1000 genomes]
rs2054560	1.00[ASN][1000 genomes]
rs2083754	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2127816	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2170268	1.00[ASN][1000 genomes]
rs3106205	1.00[ASN][1000 genomes]
rs340443	1.00[ASN][1000 genomes]
rs340450	1.00[ASN][1000 genomes]
rs36125125	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs4240280	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4336239	1.00[ASN][1000 genomes]
rs4365744	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4833371	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4834182	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4834183	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4834185	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4834187	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57074124	1.00[ASN][1000 genomes]
rs61414660	1.00[ASN][1000 genomes]
rs6534599	1.00[ASN][1000 genomes]
rs6534612	1.00[ASN][1000 genomes]
rs6841506	1.00[ASN][1000 genomes]
rs6844804	1.00[ASN][1000 genomes]
rs6852817	1.00[ASN][1000 genomes]
rs72680077	1.00[ASN][1000 genomes]
rs72680078	1.00[ASN][1000 genomes]
rs7664962	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7668919	1.00[ASN][1000 genomes]
rs7691994	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7692034	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031024	chr4:128152969-128264539	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128151600-128160400	Weak transcription	Fetal Stomach	stomach
2	chr4:128152200-128157800	Weak transcription	Fetal Lung	lung
3	chr4:128157600-128162000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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