Variant report

Variant	rs59357233
Chromosome Location	chr5:94131449-94131450
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs13359541	0.92[EUR][1000 genomes]
rs153896	0.80[EUR][1000 genomes]
rs17084095	0.92[EUR][1000 genomes]
rs255208	0.80[EUR][1000 genomes]
rs255209	0.80[EUR][1000 genomes]
rs57297740	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs57663699	1.00[ASN][1000 genomes]
rs58209835	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61327121	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6867377	0.92[EUR][1000 genomes]
rs6888297	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73133918	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73133942	1.00[ASN][1000 genomes]
rs73133946	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73133954	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7712065	1.00[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94124600-94132200	Strong transcription	Primary neutrophils fromperipheralblood	blood
2	chr5:94127400-94131600	Enhancers	Thymus	Thymus
3	chr5:94127600-94131600	Enhancers	Primary T cells fromperipheralblood	blood
4	chr5:94127800-94131600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
5	chr5:94128000-94131600	Enhancers	Primary T helper cells PMA-I stimulated	--
6	chr5:94128000-94131600	Weak transcription	Lung	lung
7	chr5:94128200-94131600	Enhancers	Primary B cells from peripheral blood	blood
8	chr5:94128800-94131600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
9	chr5:94129600-94131600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
10	chr5:94129600-94133800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr5:94129800-94131600	Genic enhancers	Fetal Thymus	thymus
12	chr5:94130200-94161600	Weak transcription	HUVEC	blood vessel
13	chr5:94130400-94131600	Weak transcription	Primary monocytes fromperipheralblood	blood
14	chr5:94130400-94137000	Weak transcription	Primary hematopoietic stem cells	blood
15	chr5:94130400-94141600	Weak transcription	Adipose Nuclei	Adipose
16	chr5:94130400-94145000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr5:94130400-94192400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr5:94130600-94134600	Strong transcription	Monocytes-CD14+_RO01746	blood
19	chr5:94130800-94134800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr5:94131000-94134600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
21	chr5:94131400-94131800	Enhancers	GM12878-XiMat	blood

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