Variant report

Variant	rs73133954
Chromosome Location	chr5:94137536-94137537
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs13359541	0.94[EUR][1000 genomes]
rs153896	0.82[EUR][1000 genomes]
rs168846	0.81[EUR][1000 genomes]
rs17084095	0.94[EUR][1000 genomes]
rs255208	0.82[EUR][1000 genomes]
rs255209	0.82[EUR][1000 genomes]
rs57297740	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs57663699	1.00[ASN][1000 genomes]
rs58209835	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59357233	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61327121	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6867377	0.94[EUR][1000 genomes]
rs6888297	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73133918	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73133942	1.00[ASN][1000 genomes]
rs73133946	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7712065	1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94130200-94161600	Weak transcription	HUVEC	blood vessel
2	chr5:94130400-94141600	Weak transcription	Adipose Nuclei	Adipose
3	chr5:94130400-94145000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr5:94130400-94192400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr5:94132200-94139400	Weak transcription	Primary neutrophils fromperipheralblood	blood
6	chr5:94134200-94141400	Weak transcription	Fetal Thymus	thymus
7	chr5:94134600-94145400	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr5:94134600-94164000	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr5:94137000-94137600	Strong transcription	Primary hematopoietic stem cells	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links