Variant report

Variant	rs73133946
Chromosome Location	chr5:94130307-94130308
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs13359541	0.92[EUR][1000 genomes]
rs153896	0.80[EUR][1000 genomes]
rs17084095	0.92[EUR][1000 genomes]
rs255208	0.80[EUR][1000 genomes]
rs255209	0.80[EUR][1000 genomes]
rs57297740	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs58209835	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs59357233	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61327121	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6867377	0.92[EUR][1000 genomes]
rs6888297	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73133918	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs73133954	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94124600-94131000	Weak transcription	Small Intestine	intestine
2	chr5:94124600-94132200	Strong transcription	Primary neutrophils fromperipheralblood	blood
3	chr5:94127400-94131600	Enhancers	Thymus	Thymus
4	chr5:94127600-94131600	Enhancers	Primary T cells fromperipheralblood	blood
5	chr5:94127800-94130400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr5:94127800-94131000	Enhancers	Primary hematopoietic stem cells short term culture	blood
7	chr5:94127800-94131000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
8	chr5:94127800-94131400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
9	chr5:94127800-94131600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
10	chr5:94128000-94130400	Enhancers	Primary hematopoietic stem cells	blood
11	chr5:94128000-94131400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
12	chr5:94128000-94131400	Enhancers	Primary T killer memory cells from peripheral blood	blood
13	chr5:94128000-94131600	Enhancers	Primary T helper cells PMA-I stimulated	--
14	chr5:94128000-94131600	Weak transcription	Lung	lung
15	chr5:94128200-94130400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr5:94128200-94131600	Enhancers	Primary B cells from peripheral blood	blood
17	chr5:94128400-94131400	Enhancers	Primary T cells from cord blood	blood
18	chr5:94128400-94131400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
19	chr5:94128400-94131400	Enhancers	Primary T helper cells fromperipheralblood	blood
20	chr5:94128600-94130400	Enhancers	Osteobl	bone
21	chr5:94128600-94130800	Enhancers	Muscle Satellite Cultured Cells	--
22	chr5:94128800-94131600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
23	chr5:94129200-94130400	Enhancers	Primary monocytes fromperipheralblood	blood
24	chr5:94129600-94130400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr5:94129600-94130400	Strong transcription	Adipose Nuclei	Adipose
26	chr5:94129600-94130800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr5:94129600-94131400	Enhancers	Primary T helper naive cells from peripheral blood	blood
28	chr5:94129600-94131600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
29	chr5:94129600-94133800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr5:94129800-94130400	Enhancers	NH-A	brain
31	chr5:94129800-94130800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr5:94129800-94131400	Enhancers	Dnd41	blood
33	chr5:94129800-94131600	Genic enhancers	Fetal Thymus	thymus
34	chr5:94130000-94130600	Weak transcription	Monocytes-CD14+_RO01746	blood
35	chr5:94130200-94130600	Enhancers	GM12878-XiMat	blood
36	chr5:94130200-94161600	Weak transcription	HUVEC	blood vessel

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