Variant report

Variant rs59413009
Chromosome Location chr15:58522297-58522298
allele A/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:58519200-58522600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr15:58520200-58522400 Enhancers Primary T cells from cord blood blood
3 chr15:58520200-58522600 Enhancers HSMMtube muscle
4 chr15:58520200-58523400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr15:58520200-58523400 Enhancers NHEK skin
6 chr15:58520400-58522400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
7 chr15:58520400-58522400 Enhancers Fetal Muscle Leg muscle
8 chr15:58520400-58522400 Enhancers HSMM muscle
9 chr15:58520400-58522600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr15:58520400-58522600 Enhancers NHLF lung
11 chr15:58520400-58522800 Enhancers Psoas Muscle Psoas
12 chr15:58520400-58523200 Enhancers Breast Myoepithelial Primary Cells Breast
13 chr15:58520400-58523200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr15:58520400-58523200 Enhancers Left Ventricle heart
15 chr15:58520400-58523200 Enhancers Right Atrium heart
16 chr15:58520400-58523600 Enhancers HMEC breast
17 chr15:58520600-58522400 Enhancers HepG2 liver
18 chr15:58520600-58522600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr15:58520600-58523200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
20 chr15:58520600-58523400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr15:58520800-58522400 Enhancers Cortex derived primary cultured neurospheres brain
22 chr15:58521000-58522400 Enhancers Duodenum Mucosa Duodenum
23 chr15:58521200-58522400 Enhancers Fetal Kidney kidney
24 chr15:58521200-58522600 Enhancers iPS-15b Cell Line embryonic stem cell
25 chr15:58521200-58522600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr15:58521200-58522600 Weak transcription Fetal Muscle Trunk muscle
27 chr15:58521200-58523200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr15:58521200-58524400 Weak transcription Pancreas Pancrea
29 chr15:58521400-58522400 Enhancers NH-A brain
30 chr15:58521400-58523200 Enhancers Fetal Heart heart
31 chr15:58521400-58525400 Weak transcription Hela-S3 cervix
32 chr15:58521400-58534200 Weak transcription Liver Liver
33 chr15:58521600-58522400 Active TSS ES-WA7 Cell Line embryonic stem cell
34 chr15:58521600-58522400 Active TSS Brain Cingulate Gyrus brain
35 chr15:58521600-58522600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr15:58521600-58524000 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr15:58521800-58522400 Enhancers Brain Germinal Matrix brain
38 chr15:58521800-58523400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr15:58522000-58522400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
40 chr15:58522000-58522400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr15:58522000-58522800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
42 chr15:58522000-58522800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
43 chr15:58522000-58523200 Enhancers H9 Cell Line embryonic stem cell
44 chr15:58522000-58523200 Enhancers HUES6 Cell Line embryonic stem cell
45 chr15:58522000-58523200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
46 chr15:58522000-58523200 Enhancers Skeletal Muscle Female skeletal muscle
47 chr15:58522000-58525600 Weak transcription A549 lung
48 chr15:58522200-58522400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr15:58522200-58522400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr15:58522200-58522400 Flanking Active TSS Brain Angular Gyrus brain

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