Variant report

Variant	rs595273
Chromosome Location	chr3:99358976-99358977
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs1618635	0.88[AFR][1000 genomes]
rs1711553	0.84[AFR][1000 genomes]
rs485715	0.84[AFR][1000 genomes]
rs563041	0.86[AFR][1000 genomes]
rs640273	1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6440724	0.81[AFR][1000 genomes]
rs6803793	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs684701	1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.85[AMR][1000 genomes]

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:99354400-99362000	Active TSS	Aorta	Aorta
2	chr3:99355600-99360600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr3:99355800-99359400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr3:99355800-99360000	Active TSS	Right Atrium	heart
5	chr3:99356000-99359000	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr3:99356000-99359000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr3:99356000-99359000	Active TSS	NH-A	brain
8	chr3:99356000-99359200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr3:99356000-99359200	Active TSS	HSMMtube	muscle
10	chr3:99356000-99360400	Active TSS	NHDF-Ad	bronchial
11	chr3:99356000-99360600	Active TSS	Stomach Smooth Muscle	stomach
12	chr3:99356000-99360800	Active TSS	NHLF	lung
13	chr3:99356200-99359600	Active TSS	Muscle Satellite Cultured Cells	--
14	chr3:99356400-99359400	Active TSS	Osteobl	bone
15	chr3:99357200-99359800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr3:99357400-99361600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr3:99357600-99360400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr3:99357600-99363800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr3:99357800-99363400	Weak transcription	Brain Hippocampus Middle	brain
20	chr3:99358000-99359200	Flanking Active TSS	HUVEC	blood vessel
21	chr3:99358000-99363200	Weak transcription	Brain Anterior Caudate	brain
22	chr3:99358000-99363600	Weak transcription	Duodenum Smooth Muscle	Duodenum
23	chr3:99358000-99363800	Weak transcription	Ovary	ovary
24	chr3:99358000-99364000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr3:99358000-99369400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr3:99358200-99359600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr3:99358200-99360000	Enhancers	Adipose Nuclei	Adipose
28	chr3:99358200-99362600	Weak transcription	Colon Smooth Muscle	Colon
29	chr3:99358200-99363600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
30	chr3:99358400-99359000	Active TSS	NHEK	skin
31	chr3:99358400-99359800	Transcr. at gene 5' and 3'	HSMM	muscle
32	chr3:99358600-99359000	Active TSS	HMEC	breast
33	chr3:99358600-99359200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr3:99358800-99359400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr3:99358800-99359400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr3:99358800-99364200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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