The 2.0 version of rSNPBase

Variant report

Variant rs59559013
Chromosome Location chr19:44564061-44564062
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44556600-44564600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr19:44557000-44565000 Weak transcription Psoas Muscle Psoas
3 chr19:44557000-44566800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:44557000-44567400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr19:44557000-44567400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr19:44557000-44567600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr19:44557000-44568800 Weak transcription HMEC breast
8 chr19:44557000-44570200 Weak transcription HUVEC blood vessel
9 chr19:44557000-44570200 Weak transcription NHDF-Ad bronchial
10 chr19:44557000-44575600 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr19:44557200-44565600 Weak transcription NHLF lung
12 chr19:44557400-44564400 Weak transcription Fetal Heart heart
13 chr19:44557400-44565000 Weak transcription Small Intestine intestine
14 chr19:44557400-44565000 Weak transcription NH-A brain
15 chr19:44557400-44570000 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr19:44557400-44570200 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr19:44557600-44564800 Weak transcription Fetal Brain Male brain
18 chr19:44558200-44571800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr19:44558200-44573200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr19:44558200-44575600 ZNF genes & repeats Liver Liver
21 chr19:44558800-44567800 Strong transcription Stomach Smooth Muscle stomach
22 chr19:44558800-44572800 ZNF genes & repeats Primary hematopoietic stem cells blood
23 chr19:44559000-44565200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
24 chr19:44559200-44569000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr19:44559200-44569000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr19:44559200-44569400 Strong transcription Fetal Stomach stomach
27 chr19:44559400-44565400 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr19:44559400-44565800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
29 chr19:44559400-44569400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr19:44559400-44570000 Weak transcription Stomach Mucosa stomach
31 chr19:44559600-44565800 Strong transcription Colonic Mucosa Colon
32 chr19:44559800-44568600 Strong transcription HSMMtube muscle
33 chr19:44560000-44568800 Strong transcription HUES64 Cell Line embryonic stem cell
34 chr19:44560200-44567200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr19:44560400-44564600 Weak transcription Primary B cells from cord blood blood
36 chr19:44560400-44564600 Weak transcription Primary B cells from peripheral blood blood
37 chr19:44560400-44566400 Weak transcription Fetal Thymus thymus
38 chr19:44560400-44566800 Weak transcription NHEK skin
39 chr19:44560800-44569400 Strong transcription Fetal Intestine Large intestine
40 chr19:44560800-44570000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr19:44561000-44568800 Strong transcription Fetal Brain Female brain
42 chr19:44561000-44569200 Strong transcription HUES48 Cell Line embryonic stem cell
43 chr19:44561200-44569600 Strong transcription HUES6 Cell Line embryonic stem cell
44 chr19:44561400-44568400 Strong transcription Brain Angular Gyrus brain
45 chr19:44561400-44568800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr19:44561400-44569000 Strong transcription Fetal Muscle Trunk muscle
47 chr19:44561400-44570000 Strong transcription Brain Hippocampus Middle brain
48 chr19:44561600-44564400 ZNF genes & repeats A549 lung
49 chr19:44561600-44566000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr19:44561600-44567400 Strong transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015