The 2.0 version of rSNPBase

Variant report

Variant rs59818431
Chromosome Location chr7:39619317-39619318
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:39606600-39619800 Weak transcription Lung lung
2 chr7:39607000-39619800 Weak transcription Ovary ovary
3 chr7:39607000-39623800 Weak transcription Pancreas Pancrea
4 chr7:39607000-39631400 Weak transcription Aorta Aorta
5 chr7:39607200-39620000 Weak transcription Rectal Smooth Muscle rectum
6 chr7:39607200-39620200 Weak transcription Small Intestine intestine
7 chr7:39607200-39620200 Weak transcription Stomach Mucosa stomach
8 chr7:39607200-39620200 Weak transcription Thymus Thymus
9 chr7:39607200-39621000 Weak transcription Right Atrium heart
10 chr7:39607200-39623200 Weak transcription H9 Cell Line embryonic stem cell
11 chr7:39607200-39628800 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr7:39607200-39629000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr7:39607600-39620200 Weak transcription Brain Substantia Nigra brain
14 chr7:39607600-39620200 Weak transcription Fetal Heart heart
15 chr7:39607600-39628600 Weak transcription Muscle Satellite Cultured Cells --
16 chr7:39607600-39629400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr7:39607800-39623400 Weak transcription NHEK skin
18 chr7:39609600-39620000 Weak transcription K562 blood
19 chr7:39609800-39620000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr7:39609800-39622200 Weak transcription Esophagus oesophagus
21 chr7:39610400-39620800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr7:39610800-39620400 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr7:39610800-39628800 Weak transcription GM12878-XiMat blood
24 chr7:39612200-39627000 Weak transcription NHLF lung
25 chr7:39612400-39619600 Weak transcription HepG2 liver
26 chr7:39612400-39620000 Weak transcription Brain Hippocampus Middle brain
27 chr7:39612400-39620000 Weak transcription NH-A brain
28 chr7:39612400-39620200 Weak transcription Brain Angular Gyrus brain
29 chr7:39612400-39626600 Weak transcription HSMM muscle
30 chr7:39612400-39628000 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr7:39612600-39619800 Weak transcription Duodenum Mucosa Duodenum
32 chr7:39612600-39620200 Weak transcription Hela-S3 cervix
33 chr7:39612600-39620400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr7:39612600-39620400 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr7:39612600-39628000 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr7:39612600-39629200 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr7:39612800-39620200 Weak transcription Dnd41 blood
38 chr7:39613200-39620000 Weak transcription HUVEC blood vessel
39 chr7:39613400-39619600 Strong transcription Fetal Muscle Leg muscle
40 chr7:39613400-39619800 Weak transcription Fetal Kidney kidney
41 chr7:39613400-39620200 Weak transcription NHDF-Ad bronchial
42 chr7:39613400-39628800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr7:39613800-39619600 Weak transcription Primary T cells fromperipheralblood blood
44 chr7:39613800-39620200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr7:39613800-39620400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr7:39613800-39621400 Weak transcription Brain Anterior Caudate brain
47 chr7:39613800-39627600 Weak transcription Primary hematopoietic stem cells blood
48 chr7:39613800-39628800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr7:39613800-39629000 Weak transcription HMEC breast
50 chr7:39614000-39619800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015