The 2.0 version of rSNPBase

Variant report

Variant rs6978059
Chromosome Location chr7:39620894-39620895
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:39607000-39623800 Weak transcription Pancreas Pancrea
2 chr7:39607000-39631400 Weak transcription Aorta Aorta
3 chr7:39607200-39621000 Weak transcription Right Atrium heart
4 chr7:39607200-39623200 Weak transcription H9 Cell Line embryonic stem cell
5 chr7:39607200-39628800 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr7:39607200-39629000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr7:39607600-39628600 Weak transcription Muscle Satellite Cultured Cells --
8 chr7:39607600-39629400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr7:39607800-39623400 Weak transcription NHEK skin
10 chr7:39609800-39622200 Weak transcription Esophagus oesophagus
11 chr7:39610800-39628800 Weak transcription GM12878-XiMat blood
12 chr7:39612200-39627000 Weak transcription NHLF lung
13 chr7:39612400-39626600 Weak transcription HSMM muscle
14 chr7:39612400-39628000 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr7:39612600-39628000 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr7:39612600-39629200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr7:39613400-39628800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr7:39613800-39621400 Weak transcription Brain Anterior Caudate brain
19 chr7:39613800-39627600 Weak transcription Primary hematopoietic stem cells blood
20 chr7:39613800-39628800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr7:39613800-39629000 Weak transcription HMEC breast
22 chr7:39614000-39623000 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr7:39614200-39629200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr7:39614800-39622800 Weak transcription Left Ventricle heart
25 chr7:39614800-39629200 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr7:39616400-39627800 Weak transcription Adipose Nuclei Adipose
27 chr7:39616400-39629000 Weak transcription Osteobl bone
28 chr7:39616600-39622200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr7:39617000-39628200 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr7:39617200-39629600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr7:39617400-39622200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr7:39617400-39623400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr7:39617400-39626800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr7:39617400-39629000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr7:39618400-39629000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr7:39618400-39633000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr7:39618800-39626400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr7:39619000-39621200 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr7:39619000-39622000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr7:39619000-39622800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr7:39619000-39628200 Weak transcription Primary T cells from cord blood blood
42 chr7:39619000-39629000 Weak transcription Fetal Thymus thymus
43 chr7:39619400-39622800 Weak transcription Fetal Muscle Trunk muscle
44 chr7:39619600-39629000 Weak transcription Fetal Muscle Leg muscle
45 chr7:39619800-39626400 Weak transcription Fetal Stomach stomach
46 chr7:39620400-39623200 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr7:39620400-39628600 Weak transcription NH-A brain
48 chr7:39620600-39621800 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr7:39620600-39622200 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr7:39620600-39622600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015