The 2.0 version of rSNPBase

Variant report

Variant rs59827616
Chromosome Location chr12:124209778-124209779
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:124197600-124234400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr12:124198400-124210600 Weak transcription NH-A brain
3 chr12:124198600-124212400 Weak transcription NHLF lung
4 chr12:124198800-124210800 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr12:124198800-124223600 Weak transcription Right Atrium heart
6 chr12:124199000-124210000 Weak transcription Colon Smooth Muscle Colon
7 chr12:124199000-124212400 Weak transcription Rectal Smooth Muscle rectum
8 chr12:124199200-124210000 Weak transcription Colonic Mucosa Colon
9 chr12:124199200-124210400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr12:124199200-124210600 Weak transcription Hela-S3 cervix
11 chr12:124199200-124212400 Weak transcription Fetal Lung lung
12 chr12:124199200-124213200 Weak transcription Pancreas Pancrea
13 chr12:124199600-124221000 Weak transcription Psoas Muscle Psoas
14 chr12:124200200-124210600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr12:124200200-124210800 Weak transcription NHDF-Ad bronchial
16 chr12:124201800-124247800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr12:124202200-124242600 Strong transcription Fetal Stomach stomach
18 chr12:124202600-124245200 Strong transcription HUES48 Cell Line embryonic stem cell
19 chr12:124202600-124245200 Strong transcription HUES64 Cell Line embryonic stem cell
20 chr12:124203000-124230600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr12:124203400-124214200 Strong transcription H1 Cell Line embryonic stem cell
22 chr12:124203400-124239800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr12:124203600-124221000 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr12:124203600-124242400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr12:124203600-124242400 Strong transcription Fetal Muscle Leg muscle
26 chr12:124203600-124244600 Strong transcription HUES6 Cell Line embryonic stem cell
27 chr12:124203600-124246000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr12:124203800-124214600 Strong transcription Cortex derived primary cultured neurospheres brain
29 chr12:124203800-124216000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr12:124203800-124240000 Strong transcription iPS-18 Cell Line embryonic stem cell
31 chr12:124203800-124245000 Strong transcription iPS-20b Cell Line embryonic stem cell
32 chr12:124203800-124248000 Strong transcription Dnd41 blood
33 chr12:124204000-124222400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr12:124204000-124235200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr12:124204000-124235800 Strong transcription Fetal Muscle Trunk muscle
36 chr12:124204000-124239800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr12:124204200-124210000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr12:124204200-124214600 Strong transcription Liver Liver
39 chr12:124204200-124230000 Strong transcription Fetal Brain Female brain
40 chr12:124204400-124209800 Strong transcription Brain Inferior Temporal Lobe brain
41 chr12:124204400-124230000 Strong transcription Placenta Placenta
42 chr12:124204600-124212400 Weak transcription Right Ventricle heart
43 chr12:124204800-124211400 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr12:124205000-124242400 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr12:124205200-124212200 Weak transcription Fetal Heart heart
46 chr12:124205400-124210600 Weak transcription H9 Cell Line embryonic stem cell
47 chr12:124205400-124217000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr12:124205400-124233200 Weak transcription Stomach Mucosa stomach
49 chr12:124206000-124241800 Strong transcription Breast Myoepithelial Primary Cells Breast
50 chr12:124206200-124237200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015