The 2.0 version of rSNPBase

Variant report

Variant rs59907454
Chromosome Location chr4:15836311-15836312
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:15811400-15851200 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr4:15811400-15852200 Weak transcription Spleen Spleen
3 chr4:15811800-15842200 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr4:15812200-15840000 Strong transcription Dnd41 blood
5 chr4:15819200-15853400 Weak transcription Duodenum Mucosa Duodenum
6 chr4:15820600-15842200 Weak transcription Primary T cells fromperipheralblood blood
7 chr4:15820600-15844400 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr4:15821200-15841600 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr4:15827600-15841600 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr4:15827600-15841800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr4:15827600-15853400 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr4:15830000-15843200 Strong transcription Primary B cells from cord blood blood
13 chr4:15833200-15843200 Strong transcription Fetal Thymus thymus
14 chr4:15833600-15836600 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr4:15834000-15842200 Strong transcription Thymus Thymus
16 chr4:15834200-15836400 Strong transcription Primary T cells from cord blood blood
17 chr4:15834200-15843200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr4:15834400-15836600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr4:15834400-15837800 Weak transcription NHEK skin
20 chr4:15834600-15837800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr4:15834600-15837800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr4:15834600-15837800 Weak transcription HMEC breast
23 chr4:15834600-15844400 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr4:15834800-15841600 Weak transcription Primary monocytes fromperipheralblood blood
25 chr4:15834800-15842200 Weak transcription Left Ventricle heart
26 chr4:15834800-15851800 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr4:15834800-15852800 Weak transcription Primary B cells from peripheral blood blood
28 chr4:15835000-15838200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr4:15835000-15857400 Weak transcription Psoas Muscle Psoas
30 chr4:15835200-15836400 Strong transcription Primary hematopoietic stem cells blood
31 chr4:15835400-15836400 Strong transcription Monocytes-CD14+_RO01746 blood
32 chr4:15835600-15836400 Strong transcription GM12878-XiMat blood
33 chr4:15835800-15837800 Weak transcription Esophagus oesophagus
34 chr4:15836200-15836400 Enhancers Aorta Aorta

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Last update: Aug 31, 2015