Variant report

Variant	rs5994419
Chromosome Location	chr22:32066411-32066412
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11089522	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11702881	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11705292	0.82[ASN][1000 genomes]
rs131221	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs131231	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs5994420	0.91[AFR][1000 genomes]
rs5998069	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs5998074	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs5998078	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5998086	0.81[AFR][1000 genomes]
rs760908	0.86[AFR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:32058800-32072400	Weak transcription	Fetal Heart	heart
2	chr22:32059000-32066600	Weak transcription	Hela-S3	cervix
3	chr22:32059000-32067000	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr22:32059000-32070000	Weak transcription	Primary B cells from cord blood	blood
5	chr22:32059000-32072400	Weak transcription	Rectal Mucosa Donor 29	rectum
6	chr22:32059000-32072400	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr22:32061800-32066600	Weak transcription	HepG2	liver
8	chr22:32061800-32066600	Weak transcription	K562	blood
9	chr22:32061800-32066800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr22:32061800-32067000	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr22:32062000-32067000	Weak transcription	Primary neutrophils fromperipheralblood	blood
12	chr22:32062200-32066800	Weak transcription	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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