Variant report

Variant	rs59961429
Chromosome Location	chr4:99593732-99593733
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10516436	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11097628	0.94[ASN][1000 genomes]
rs11934932	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11942277	0.94[ASN][1000 genomes]
rs11947402	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12500890	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12503008	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12503450	0.86[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12508313	0.94[ASN][1000 genomes]
rs17027976	0.94[ASN][1000 genomes]
rs1918742	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1918743	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2037797	0.94[ASN][1000 genomes]
rs2866020	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4128328	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4129894	0.83[ASN][1000 genomes]
rs4699360	1.00[ASN][1000 genomes]
rs4699665	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56095565	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60066503	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61112015	0.94[ASN][1000 genomes]
rs7667862	0.94[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:99585200-99593800	Weak transcription	Stomach Mucosa	stomach
2	chr4:99585200-99594200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr4:99586600-99593800	Weak transcription	Thymus	Thymus
4	chr4:99587200-99593800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr4:99587200-99598800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr4:99587400-99594000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr4:99592600-99594400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr4:99593400-99593800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr4:99593400-99594400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr4:99593600-99594600	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr4:99593600-99594800	Enhancers	Primary hematopoietic stem cells	blood

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