Variant report

Variant	rs11934932
Chromosome Location	chr4:99605385-99605386
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:99604569..99606105-chr4:99614241..99616504,2	K562	blood:
2	chr4:99602994..99605915-chr4:99606263..99608847,3	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10516436	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11097628	0.94[ASN][1000 genomes]
rs11942277	0.94[ASN][1000 genomes]
rs11947402	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12500890	0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12503008	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12503450	0.97[ASN][1000 genomes]
rs12508313	0.94[ASN][1000 genomes]
rs17027889	0.82[CEU][hapmap]
rs17027976	0.88[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1918742	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1918743	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2037797	0.94[ASN][1000 genomes]
rs2866020	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4128328	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4129894	0.85[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs4699360	1.00[ASN][1000 genomes]
rs4699665	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56095565	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59961429	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60066503	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61112015	0.94[ASN][1000 genomes]
rs7667862	0.94[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:99594600-99606200	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr4:99601200-99609600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr4:99601400-99606200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr4:99601400-99606200	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr4:99601400-99606800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr4:99601600-99606200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr4:99603600-99607600	Enhancers	Liver	Liver
8	chr4:99604200-99609800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr4:99604400-99605800	Weak transcription	Stomach Mucosa	stomach
10	chr4:99604400-99608600	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr4:99604400-99609600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr4:99604400-99609800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr4:99604400-99612800	Weak transcription	Fetal Heart	heart
14	chr4:99604600-99608600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr4:99604800-99605800	Weak transcription	HUVEC	blood vessel
16	chr4:99604800-99608600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr4:99604800-99608800	Weak transcription	Osteobl	bone
18	chr4:99605000-99606000	Weak transcription	K562	blood
19	chr4:99605000-99609200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr4:99605200-99605400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr4:99605200-99606200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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