Variant report

Variant	rs59978441
Chromosome Location	chr14:69108031-69108032
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11847037	0.81[AMR][1000 genomes]
rs11848320	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11850918	0.93[AMR][1000 genomes]
rs17756651	0.84[AMR][1000 genomes]
rs17835116	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17835200	0.96[EUR][1000 genomes]
rs55779318	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs55877285	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs56070472	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs61987106	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs61987107	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs61987114	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs61987120	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs61987122	0.96[EUR][1000 genomes]
rs8017092	0.81[AMR][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69105000-69121600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:69105600-69113000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr14:69105800-69113200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr14:69106000-69117000	Weak transcription	Fetal Intestine Large	intestine
5	chr14:69106200-69112800	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr14:69106200-69115600	Weak transcription	Esophagus	oesophagus
7	chr14:69106400-69118200	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr14:69106400-69118400	Weak transcription	Spleen	Spleen
9	chr14:69106600-69111000	Weak transcription	Fetal Heart	heart
10	chr14:69106600-69111800	Weak transcription	Rectal Smooth Muscle	rectum
11	chr14:69106800-69116000	Weak transcription	Ovary	ovary
12	chr14:69107000-69110600	Weak transcription	Right Ventricle	heart
13	chr14:69107200-69108200	Weak transcription	Stomach Smooth Muscle	stomach
14	chr14:69107400-69108800	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
15	chr14:69107800-69109000	ZNF genes & repeats	Primary B cells from cord blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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