Variant report

Variant	rs61987106
Chromosome Location	chr14:69103128-69103129
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69091753..69104091-chr14:69256141..69263760,20	MCF-7	breast:
2	chr14:69090615..69103406-chr14:69249821..69264188,29	MCF-7	breast:

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10438159	0.91[EUR][1000 genomes]
rs11847037	0.84[EUR][1000 genomes]
rs11848320	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11850918	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17756651	0.91[EUR][1000 genomes]
rs17834977	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17835116	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17835200	0.87[EUR][1000 genomes]
rs2145156	0.91[EUR][1000 genomes]
rs55779318	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs55877285	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs56070472	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs59978441	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs61987107	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs61987114	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs61987120	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs61987122	0.87[EUR][1000 genomes]
rs8009601	0.91[EUR][1000 genomes]
rs8017092	0.84[EUR][1000 genomes]

No data

Chromatin state (count:89 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69092200-69107000	Enhancers	Fetal Muscle Leg	muscle
2	chr14:69093000-69104400	Enhancers	Fetal Lung	lung
3	chr14:69095200-69104200	Weak transcription	NH-A	brain
4	chr14:69095200-69104400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr14:69095600-69107400	Enhancers	Fetal Stomach	stomach
6	chr14:69095800-69104400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr14:69095800-69107800	Weak transcription	Fetal Brain Female	brain
8	chr14:69096200-69104000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
9	chr14:69096400-69105400	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr14:69096400-69105400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
11	chr14:69096800-69105000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr14:69097200-69104400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr14:69098600-69104600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr14:69098800-69104200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr14:69098800-69105200	Weak transcription	Pancreas	Pancrea
16	chr14:69100600-69104000	Weak transcription	Primary monocytes fromperipheralblood	blood
17	chr14:69100600-69104200	Weak transcription	Osteobl	bone
18	chr14:69100800-69104200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr14:69100800-69104400	Weak transcription	Ovary	ovary
20	chr14:69100800-69104400	Weak transcription	Rectal Mucosa Donor 31	rectum
21	chr14:69100800-69105400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
22	chr14:69100800-69105400	Weak transcription	Sigmoid Colon	Sigmoid Colon
23	chr14:69100800-69107000	Weak transcription	Small Intestine	intestine
24	chr14:69100800-69107800	Weak transcription	Primary B cells from cord blood	blood
25	chr14:69101000-69103400	Weak transcription	Primary T cells from cord blood	blood
26	chr14:69101000-69103400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr14:69101000-69103400	Weak transcription	Fetal Intestine Large	intestine
28	chr14:69101000-69103400	Weak transcription	NHLF	lung
29	chr14:69101000-69104000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr14:69101000-69104000	Weak transcription	NHDF-Ad	bronchial
31	chr14:69101000-69104200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr14:69101000-69104200	Weak transcription	Duodenum Mucosa	Duodenum
33	chr14:69101000-69104200	Weak transcription	HMEC	breast
34	chr14:69101000-69104400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr14:69101000-69104400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr14:69101000-69104600	Weak transcription	Stomach Mucosa	stomach
37	chr14:69101000-69104800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
38	chr14:69101000-69105000	Weak transcription	Primary B cells from peripheral blood	blood
39	chr14:69101000-69105200	Weak transcription	Primary hematopoietic stem cells	blood
40	chr14:69101000-69105200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr14:69101200-69103200	Weak transcription	Stomach Smooth Muscle	stomach
42	chr14:69101200-69103400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
43	chr14:69101200-69103400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr14:69101200-69103400	Weak transcription	Placenta	Placenta
45	chr14:69101200-69104200	Weak transcription	Muscle Satellite Cultured Cells	--
46	chr14:69101200-69104200	Weak transcription	Fetal Heart	heart
47	chr14:69101200-69104200	Weak transcription	Skeletal Muscle Male	skeletal muscle
48	chr14:69101200-69104600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr14:69101200-69104800	Weak transcription	Fetal Brain Male	brain
50	chr14:69101200-69105200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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