The 2.0 version of rSNPBase

Variant report

Variant rs59979250
Chromosome Location chr4:20752842-20752843
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:20725000-20753000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr4:20730600-20757600 Weak transcription HSMM muscle
3 chr4:20732600-20758400 Weak transcription Brain Angular Gyrus brain
4 chr4:20739200-20761200 Weak transcription Fetal Heart heart
5 chr4:20739600-20755200 Weak transcription K562 blood
6 chr4:20740200-20755200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr4:20740600-20754800 Weak transcription Dnd41 blood
8 chr4:20740600-20756600 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr4:20740600-20757200 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr4:20740600-20763600 Weak transcription Brain Anterior Caudate brain
11 chr4:20740800-20756000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr4:20740800-20757200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr4:20740800-20757600 Weak transcription Rectal Smooth Muscle rectum
14 chr4:20740800-20763600 Weak transcription HSMMtube muscle
15 chr4:20740800-20770600 Weak transcription Brain Inferior Temporal Lobe brain
16 chr4:20740800-20791200 Weak transcription Ovary ovary
17 chr4:20741000-20753600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr4:20741000-20757800 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr4:20741600-20754200 Weak transcription Fetal Lung lung
20 chr4:20741600-20756200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr4:20741800-20757400 Weak transcription Primary T cells from cord blood blood
22 chr4:20745600-20757600 Weak transcription NHEK skin
23 chr4:20746800-20761400 Weak transcription Aorta Aorta
24 chr4:20746800-20775000 Weak transcription Left Ventricle heart
25 chr4:20747200-20754800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr4:20747200-20757600 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr4:20747400-20755400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr4:20747400-20755800 Weak transcription Fetal Brain Female brain
29 chr4:20747600-20754200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr4:20747600-20754600 Weak transcription Fetal Muscle Leg muscle
31 chr4:20747600-20755800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr4:20747800-20753400 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr4:20747800-20753400 Weak transcription Adipose Nuclei Adipose
34 chr4:20747800-20754200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr4:20747800-20757400 Weak transcription Fetal Intestine Large intestine
36 chr4:20748000-20756200 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr4:20748200-20754000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr4:20749600-20756400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr4:20749600-20763800 Weak transcription Brain Germinal Matrix brain
40 chr4:20750000-20754800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr4:20751000-20757000 Weak transcription Primary B cells from cord blood blood
42 chr4:20751600-20754800 Weak transcription Primary T cells fromperipheralblood blood
43 chr4:20752200-20754000 Weak transcription Liver Liver
44 chr4:20752800-20755000 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015