The 2.0 version of rSNPBase

Variant report

Variant rs6032973
Chromosome Location chr20:10839564-10839565
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:10830000-10839800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr20:10830000-10845000 Weak transcription Spleen Spleen
3 chr20:10830200-10843600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr20:10830200-10843800 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr20:10835400-10843600 Weak transcription Left Ventricle heart
6 chr20:10835800-10843600 Weak transcription Aorta Aorta
7 chr20:10836000-10841400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr20:10836000-10841600 Weak transcription NHEK skin
9 chr20:10836000-10843800 Weak transcription HMEC breast
10 chr20:10838200-10844800 Weak transcription Colonic Mucosa Colon
11 chr20:10838400-10839800 Weak transcription Rectal Smooth Muscle rectum
12 chr20:10838400-10839800 Enhancers A549 lung
13 chr20:10838400-10840000 Weak transcription Gastric stomach
14 chr20:10838400-10841000 Weak transcription Primary B cells from cord blood blood
15 chr20:10838400-10841600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr20:10838400-10842200 Weak transcription Duodenum Mucosa Duodenum
17 chr20:10838400-10842200 Weak transcription Stomach Mucosa stomach
18 chr20:10838400-10842600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr20:10838400-10843600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr20:10838400-10843600 Weak transcription Esophagus oesophagus
21 chr20:10838400-10843600 Weak transcription Pancreas Pancrea
22 chr20:10838400-10843600 Weak transcription Right Atrium heart
23 chr20:10838400-10843800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr20:10838400-10843800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr20:10838400-10843800 Weak transcription Adipose Nuclei Adipose
26 chr20:10838400-10843800 Weak transcription NHLF lung
27 chr20:10838400-10845000 Weak transcription Lung lung
28 chr20:10838600-10840200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr20:10838600-10841600 Weak transcription Muscle Satellite Cultured Cells --
30 chr20:10838600-10841800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr20:10838600-10842000 Weak transcription HepG2 liver
32 chr20:10838600-10842200 Weak transcription Osteobl bone
33 chr20:10838600-10843600 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr20:10838600-10844000 Weak transcription Fetal Muscle Leg muscle
35 chr20:10838600-10844600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr20:10838800-10839600 Enhancers Primary neutrophils fromperipheralblood blood
37 chr20:10838800-10842000 Weak transcription HUVEC blood vessel
38 chr20:10838800-10842200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr20:10838800-10842200 Weak transcription Colon Smooth Muscle Colon
40 chr20:10838800-10842200 Weak transcription Fetal Intestine Small intestine
41 chr20:10839000-10841000 Weak transcription Hela-S3 cervix
42 chr20:10839000-10841000 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr20:10839000-10841200 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr20:10839000-10841800 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr20:10839200-10841000 Weak transcription Primary monocytes fromperipheralblood blood
46 chr20:10839400-10844800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015