The 2.0 version of rSNPBase

Variant report

Variant rs60391135
Chromosome Location chr19:24229034-24229035
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:24217400-24257600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:24217600-24230800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:24217600-24258400 Weak transcription Psoas Muscle Psoas
4 chr19:24218200-24230600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr19:24218200-24231000 Weak transcription HMEC breast
6 chr19:24218400-24230800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr19:24218800-24231000 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr19:24218800-24232400 Weak transcription Stomach Mucosa stomach
9 chr19:24220000-24229400 Weak transcription Spleen Spleen
10 chr19:24220000-24229400 Weak transcription Hela-S3 cervix
11 chr19:24220000-24229400 Weak transcription HUVEC blood vessel
12 chr19:24220000-24229600 Weak transcription Rectal Smooth Muscle rectum
13 chr19:24220000-24232200 Weak transcription K562 blood
14 chr19:24220000-24256800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr19:24220200-24229200 Weak transcription Brain Anterior Caudate brain
16 chr19:24220200-24229400 Weak transcription Brain Cingulate Gyrus brain
17 chr19:24220200-24229400 Weak transcription Colonic Mucosa Colon
18 chr19:24220200-24230800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr19:24220200-24231600 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr19:24221200-24244600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr19:24221800-24229200 Weak transcription Fetal Thymus thymus
22 chr19:24221800-24231200 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr19:24222000-24229400 Weak transcription Muscle Satellite Cultured Cells --
24 chr19:24222000-24230200 Weak transcription Brain Angular Gyrus brain
25 chr19:24222000-24230200 Weak transcription Gastric stomach
26 chr19:24222000-24231000 Weak transcription HepG2 liver
27 chr19:24222000-24231400 Weak transcription Fetal Brain Male brain
28 chr19:24222000-24234200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr19:24222200-24230200 Weak transcription HSMMtube muscle
30 chr19:24222200-24230800 Weak transcription Esophagus oesophagus
31 chr19:24222600-24233200 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr19:24223000-24230800 Weak transcription NHLF lung
33 chr19:24223200-24231000 Weak transcription Small Intestine intestine
34 chr19:24223600-24229400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr19:24223600-24230800 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr19:24223600-24232200 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr19:24223800-24230200 Weak transcription NHDF-Ad bronchial
38 chr19:24223800-24233000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr19:24223800-24243400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr19:24224000-24229400 Weak transcription Primary hematopoietic stem cells blood
41 chr19:24224000-24229400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr19:24224000-24229400 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr19:24224000-24230200 Weak transcription NHEK skin
44 chr19:24224000-24231400 Weak transcription Primary B cells from cord blood blood
45 chr19:24224800-24235400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr19:24224800-24244600 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr19:24225000-24244400 Strong transcription Thymus Thymus
48 chr19:24225000-24245400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr19:24225000-24252000 Strong transcription Primary hematopoietic stem cells short term culture blood
50 chr19:24225000-24257600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015