The 2.0 version of rSNPBase

Variant report

Variant rs6044061
Chromosome Location chr20:16502120-16502121
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16431400-16508200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr20:16453600-16508200 Weak transcription Stomach Mucosa stomach
3 chr20:16467000-16508800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr20:16467400-16507000 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr20:16469600-16507600 Weak transcription HSMMtube muscle
6 chr20:16470200-16508600 Weak transcription NHLF lung
7 chr20:16472800-16517400 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr20:16475000-16505800 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr20:16480600-16509400 Weak transcription K562 blood
10 chr20:16482600-16507200 Weak transcription HSMM muscle
11 chr20:16485200-16508600 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr20:16485600-16508000 Weak transcription Primary T cells fromperipheralblood blood
13 chr20:16485800-16521200 Weak transcription Right Ventricle heart
14 chr20:16488600-16507000 Weak transcription Muscle Satellite Cultured Cells --
15 chr20:16488600-16507200 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr20:16488600-16507200 Weak transcription Osteobl bone
17 chr20:16488800-16508800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr20:16488800-16509200 Weak transcription Small Intestine intestine
19 chr20:16489000-16507200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr20:16489000-16511000 Weak transcription Colonic Mucosa Colon
21 chr20:16489200-16507000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr20:16489200-16508600 Weak transcription HepG2 liver
23 chr20:16489200-16512200 Weak transcription Gastric stomach
24 chr20:16489200-16521000 Weak transcription Spleen Spleen
25 chr20:16489400-16506000 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr20:16489400-16507000 Weak transcription H9 Cell Line embryonic stem cell
27 chr20:16489400-16507800 Weak transcription NHEK skin
28 chr20:16489400-16510800 Weak transcription Lung lung
29 chr20:16489400-16517600 Weak transcription Pancreas Pancrea
30 chr20:16490400-16510200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr20:16491800-16507000 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr20:16491800-16508600 Weak transcription Fetal Kidney kidney
33 chr20:16491800-16511000 Weak transcription Esophagus oesophagus
34 chr20:16492000-16508600 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr20:16492000-16509800 Weak transcription Rectal Smooth Muscle rectum
36 chr20:16492400-16508600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr20:16492400-16517800 Weak transcription Colon Smooth Muscle Colon
38 chr20:16492600-16528800 Weak transcription Primary B cells from cord blood blood
39 chr20:16492800-16506000 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr20:16493000-16505800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr20:16493000-16507200 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr20:16493000-16521200 Weak transcription Liver Liver
43 chr20:16493200-16507400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr20:16493200-16507600 Weak transcription Left Ventricle heart
45 chr20:16493400-16505400 Weak transcription Adipose Nuclei Adipose
46 chr20:16493600-16505600 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr20:16493600-16505600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr20:16493600-16508800 Weak transcription Fetal Lung lung
49 chr20:16493600-16509400 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr20:16493600-16516200 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015