Variant report

Variant rs6135769
Chromosome Location chr20:16488083-16488084
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16431400-16508200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr20:16449400-16500600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr20:16451200-16488400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr20:16453600-16508200 Weak transcription Stomach Mucosa stomach
5 chr20:16456800-16488200 Weak transcription Rectal Smooth Muscle rectum
6 chr20:16460800-16488200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr20:16461000-16491200 Weak transcription Placenta Placenta
8 chr20:16463000-16498000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr20:16463800-16495000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr20:16464400-16491400 Weak transcription Fetal Kidney kidney
11 chr20:16465400-16488200 Weak transcription Small Intestine intestine
12 chr20:16466600-16489600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr20:16467000-16508800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr20:16467400-16500800 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr20:16467400-16507000 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr20:16467800-16494600 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr20:16469600-16507600 Weak transcription HSMMtube muscle
18 chr20:16469800-16496800 Weak transcription Brain Angular Gyrus brain
19 chr20:16470000-16488200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr20:16470200-16508600 Weak transcription NHLF lung
21 chr20:16470800-16496600 Weak transcription Fetal Brain Female brain
22 chr20:16472600-16488200 Weak transcription Lung lung
23 chr20:16472600-16488200 Weak transcription Osteobl bone
24 chr20:16472800-16517400 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr20:16475000-16505800 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr20:16478000-16500600 Weak transcription H1 Cell Line embryonic stem cell
27 chr20:16478200-16488200 Weak transcription Aorta Aorta
28 chr20:16479600-16493400 Weak transcription Fetal Brain Male brain
29 chr20:16480000-16490200 Weak transcription NHDF-Ad bronchial
30 chr20:16480600-16509400 Weak transcription K562 blood
31 chr20:16481000-16490000 Weak transcription NH-A brain
32 chr20:16482600-16507200 Weak transcription HSMM muscle
33 chr20:16483000-16494000 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr20:16483400-16489200 Strong transcription Liver Liver
35 chr20:16483600-16489200 Strong transcription Fetal Intestine Large intestine
36 chr20:16483600-16489400 Strong transcription Duodenum Smooth Muscle Duodenum
37 chr20:16483600-16489400 Strong transcription Ovary ovary
38 chr20:16483600-16489400 Strong transcription Sigmoid Colon Sigmoid Colon
39 chr20:16483600-16490000 Weak transcription Placenta Amnion Placenta Amnion
40 chr20:16483800-16488800 Strong transcription Stomach Smooth Muscle stomach
41 chr20:16483800-16489200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr20:16483800-16489200 Strong transcription Primary T cells from cord blood blood
43 chr20:16483800-16489200 Strong transcription Fetal Adrenal Gland Adrenal Gland
44 chr20:16483800-16489200 Strong transcription Fetal Muscle Leg muscle
45 chr20:16483800-16489400 Strong transcription Primary T helper cells fromperipheralblood blood
46 chr20:16483800-16489400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr20:16483800-16490000 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr20:16483800-16493800 Strong transcription Duodenum Mucosa Duodenum
49 chr20:16483800-16493800 Strong transcription Rectal Mucosa Donor 29 rectum
50 chr20:16483800-16494000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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