Variant report

Variant rs6050465
Chromosome Location chr20:25209521-25209522
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25178600-25212200 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr20:25193400-25210800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr20:25196800-25210400 Weak transcription GM12878-XiMat blood
4 chr20:25198000-25214000 Weak transcription Fetal Lung lung
5 chr20:25198400-25212200 Enhancers Fetal Heart heart
6 chr20:25199000-25212600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr20:25199200-25210600 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr20:25199200-25212000 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr20:25199400-25210600 Weak transcription Primary B cells from peripheral blood blood
10 chr20:25202200-25209600 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr20:25204200-25213800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr20:25204200-25222800 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr20:25204400-25218200 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr20:25204800-25210400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr20:25204800-25213600 Weak transcription Primary hematopoietic stem cells blood
16 chr20:25206200-25211400 Enhancers Right Atrium heart
17 chr20:25206400-25210000 Weak transcription Primary T cells fromperipheralblood blood
18 chr20:25206600-25214000 Weak transcription Placenta Amnion Placenta Amnion
19 chr20:25206800-25212800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr20:25206800-25218200 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr20:25207000-25210200 Weak transcription Fetal Brain Female brain
22 chr20:25207200-25210800 Enhancers Right Ventricle heart
23 chr20:25207200-25212600 Weak transcription Brain Germinal Matrix brain
24 chr20:25207200-25213800 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr20:25207200-25213800 Weak transcription Duodenum Mucosa Duodenum
26 chr20:25207400-25211000 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr20:25207400-25213200 Weak transcription Fetal Thymus thymus
28 chr20:25207800-25210600 Weak transcription Aorta Aorta
29 chr20:25207800-25218200 Weak transcription Spleen Spleen
30 chr20:25207800-25218200 Weak transcription Dnd41 blood
31 chr20:25208000-25210600 Weak transcription Fetal Stomach stomach
32 chr20:25208000-25212200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr20:25208000-25212600 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr20:25208400-25210000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr20:25208400-25210000 Weak transcription Brain Hippocampus Middle brain
36 chr20:25208400-25210000 Weak transcription Stomach Mucosa stomach
37 chr20:25208400-25210200 Weak transcription Brain Anterior Caudate brain
38 chr20:25208400-25210400 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr20:25208400-25210600 Weak transcription Thymus Thymus
40 chr20:25208400-25212200 Weak transcription Primary T cells from cord blood blood
41 chr20:25208400-25213400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr20:25208400-25213600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr20:25208400-25214000 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr20:25208400-25214000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr20:25208400-25214000 Weak transcription Brain Inferior Temporal Lobe brain
46 chr20:25208400-25214000 Weak transcription Placenta Placenta
47 chr20:25208400-25214200 Weak transcription Brain Substantia Nigra brain
48 chr20:25208600-25210000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr20:25208600-25210000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr20:25208600-25210000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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