Variant report

Variant rs6050478
Chromosome Location chr20:25221913-25221914
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25204200-25222800 Weak transcription HUES64 Cell Line embryonic stem cell
2 chr20:25213400-25222200 Enhancers HMEC breast
3 chr20:25213600-25222200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr20:25214400-25223000 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr20:25215400-25223200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr20:25215800-25222800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr20:25216000-25222800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr20:25217600-25227600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr20:25219000-25222000 Enhancers HSMM muscle
10 chr20:25219000-25226000 Weak transcription Colonic Mucosa Colon
11 chr20:25219000-25227400 Weak transcription Colon Smooth Muscle Colon
12 chr20:25219400-25222000 Enhancers NHEK skin
13 chr20:25219400-25226800 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr20:25219400-25226800 Weak transcription Right Ventricle heart
15 chr20:25219400-25227600 Weak transcription Brain Inferior Temporal Lobe brain
16 chr20:25219400-25228000 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr20:25219600-25222800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr20:25219600-25227000 Weak transcription NHDF-Ad bronchial
19 chr20:25219800-25227400 Weak transcription NHLF lung
20 chr20:25220200-25222200 Enhancers A549 lung
21 chr20:25220200-25227000 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr20:25220400-25227400 Weak transcription Esophagus oesophagus
23 chr20:25220600-25226800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr20:25220600-25227200 Weak transcription Placenta Amnion Placenta Amnion
25 chr20:25220800-25226000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr20:25221000-25222200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr20:25221200-25222000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr20:25221600-25222000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr20:25221600-25222000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr20:25221600-25222000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
31 chr20:25221600-25222000 Enhancers Fetal Kidney kidney
32 chr20:25221600-25222000 Enhancers HSMMtube muscle
33 chr20:25221600-25222400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
34 chr20:25221600-25222400 Enhancers K562 blood
35 chr20:25221600-25223000 Enhancers HUES6 Cell Line embryonic stem cell
36 chr20:25221600-25223000 Enhancers HepG2 liver
37 chr20:25221800-25222000 Enhancers HUES48 Cell Line embryonic stem cell
38 chr20:25221800-25222000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr20:25221800-25222000 Enhancers Fetal Lung lung
40 chr20:25221800-25222400 Enhancers NH-A brain
41 chr20:25221800-25222800 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr20:25221800-25223000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr20:25221800-25224200 Weak transcription Fetal Intestine Large intestine
44 chr20:25221800-25225800 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr20:25221800-25226000 Weak transcription Fetal Heart heart
46 chr20:25221800-25226800 Weak transcription Muscle Satellite Cultured Cells --
47 chr20:25221800-25226800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links