Variant report

Variant rs6050476
Chromosome Location chr20:25221010-25221011
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25204200-25222800 Weak transcription HUES64 Cell Line embryonic stem cell
2 chr20:25213200-25221800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr20:25213400-25222200 Enhancers HMEC breast
4 chr20:25213600-25222200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr20:25214400-25223000 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr20:25215200-25221800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr20:25215400-25223200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr20:25215600-25221600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr20:25215800-25221600 Weak transcription Fetal Kidney kidney
10 chr20:25215800-25222800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr20:25216000-25222800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr20:25217600-25227600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr20:25218800-25221600 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr20:25219000-25221400 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr20:25219000-25222000 Enhancers HSMM muscle
16 chr20:25219000-25226000 Weak transcription Colonic Mucosa Colon
17 chr20:25219000-25227400 Weak transcription Colon Smooth Muscle Colon
18 chr20:25219200-25221800 Enhancers Muscle Satellite Cultured Cells --
19 chr20:25219400-25221600 Weak transcription Fetal Heart heart
20 chr20:25219400-25221800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
21 chr20:25219400-25222000 Enhancers NHEK skin
22 chr20:25219400-25226800 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr20:25219400-25226800 Weak transcription Right Ventricle heart
24 chr20:25219400-25227600 Weak transcription Brain Inferior Temporal Lobe brain
25 chr20:25219400-25228000 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr20:25219600-25222800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr20:25219600-25227000 Weak transcription NHDF-Ad bronchial
28 chr20:25219800-25221600 Weak transcription HSMMtube muscle
29 chr20:25219800-25227400 Weak transcription NHLF lung
30 chr20:25220000-25221600 Weak transcription Osteobl bone
31 chr20:25220200-25221400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr20:25220200-25221600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr20:25220200-25222200 Enhancers A549 lung
34 chr20:25220200-25227000 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr20:25220400-25221600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr20:25220400-25227400 Weak transcription Esophagus oesophagus
37 chr20:25220600-25226800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr20:25220600-25227200 Weak transcription Placenta Amnion Placenta Amnion
39 chr20:25220800-25221200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr20:25220800-25221600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr20:25220800-25221600 Weak transcription K562 blood
42 chr20:25220800-25221800 Enhancers Rectal Mucosa Donor 31 rectum
43 chr20:25220800-25221800 Weak transcription NH-A brain
44 chr20:25220800-25226000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr20:25221000-25222200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links