Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:117398297..117400947-chr6:117402400..117403953,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11153647	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12528792	0.90[EUR][1000 genomes]
rs13192555	0.82[ASN][1000 genomes]
rs2456995	0.86[AFR][1000 genomes]
rs2456997	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36008353	0.82[ASN][1000 genomes]
rs3851204	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs488839	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs494211	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs569578	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs571392	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs591538	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62426712	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62426713	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62430529	0.90[EUR][1000 genomes]
rs625602	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs652308	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6568971	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs666591	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7762412	0.90[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:117397400-117399400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr6:117397400-117399400	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr6:117399000-117399600	Enhancers	Sigmoid Colon	Sigmoid Colon

Quick Search: