Variant report
Variant | rs13192555 |
---|---|
Chromosome Location | chr6:117406666-117406667 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11153647 | 0.95[ASN][1000 genomes] |
rs12528792 | 0.90[ASN][1000 genomes] |
rs13214495 | 0.88[ASN][1000 genomes] |
rs1508303 | 0.84[ASN][1000 genomes] |
rs2456997 | 0.82[ASN][1000 genomes] |
rs36008353 | 0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs3851204 | 0.95[ASN][1000 genomes] |
rs488839 | 0.82[ASN][1000 genomes] |
rs494211 | 0.82[ASN][1000 genomes] |
rs514239 | 0.80[ASN][1000 genomes] |
rs569578 | 0.82[ASN][1000 genomes] |
rs571392 | 0.82[ASN][1000 genomes] |
rs591538 | 0.82[ASN][1000 genomes] |
rs607164 | 0.82[ASN][1000 genomes] |
rs62426712 | 0.95[ASN][1000 genomes] |
rs62426713 | 0.95[ASN][1000 genomes] |
rs62426714 | 0.88[AMR][1000 genomes];0.83[EUR][1000 genomes] |
rs62430529 | 0.88[ASN][1000 genomes] |
rs62430538 | 0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs625602 | 0.82[ASN][1000 genomes] |
rs652308 | 0.82[ASN][1000 genomes] |
rs6568971 | 0.82[ASN][1000 genomes] |
rs666591 | 0.82[ASN][1000 genomes] |
rs7762412 | 0.90[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv969322 | chr6:117403778-117415162 | Enhancers Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:117406600-117406800 | Active TSS | Sigmoid Colon | Sigmoid Colon |