The 2.0 version of rSNPBase

Variant report

Variant rs61203524
Chromosome Location chr15:82447326-82447327
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:82399000-82452200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr15:82416200-82452400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr15:82416400-82454000 Weak transcription Colonic Mucosa Colon
4 chr15:82419200-82470600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr15:82420000-82457000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr15:82420400-82458400 Weak transcription HepG2 liver
7 chr15:82423200-82454800 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr15:82426000-82457000 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr15:82427600-82456600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr15:82430400-82452400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr15:82430400-82455200 Weak transcription Rectal Smooth Muscle rectum
12 chr15:82431200-82448200 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr15:82431200-82450000 Weak transcription GM12878-XiMat blood
14 chr15:82431200-82452400 Weak transcription Esophagus oesophagus
15 chr15:82431200-82455000 Weak transcription H1 Cell Line embryonic stem cell
16 chr15:82431200-82461200 Weak transcription Small Intestine intestine
17 chr15:82432600-82454800 Weak transcription Brain Inferior Temporal Lobe brain
18 chr15:82432600-82454800 Weak transcription Colon Smooth Muscle Colon
19 chr15:82432600-82457800 Weak transcription Fetal Lung lung
20 chr15:82432600-82476400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr15:82432600-82552800 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr15:82433400-82453800 Weak transcription Stomach Mucosa stomach
23 chr15:82433400-82458400 Weak transcription Fetal Kidney kidney
24 chr15:82438400-82456800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr15:82439400-82455400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr15:82439800-82451200 Weak transcription NH-A brain
27 chr15:82439800-82454800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr15:82439800-82465600 Weak transcription K562 blood
29 chr15:82440400-82452000 Weak transcription Osteobl bone
30 chr15:82440400-82455000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr15:82440400-82458200 Weak transcription HUVEC blood vessel
32 chr15:82440800-82452200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr15:82440800-82453000 Strong transcription Primary monocytes fromperipheralblood blood
34 chr15:82441400-82469600 Weak transcription Fetal Brain Male brain
35 chr15:82442800-82454400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr15:82443000-82453200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr15:82443000-82454800 Weak transcription Brain Hippocampus Middle brain
38 chr15:82443400-82450200 Strong transcription HMEC breast
39 chr15:82443400-82457000 Weak transcription Brain Cingulate Gyrus brain
40 chr15:82444000-82452400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr15:82444000-82452400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr15:82444000-82452400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr15:82444000-82452400 Weak transcription Pancreas Pancrea
44 chr15:82444000-82455800 Weak transcription Fetal Brain Female brain
45 chr15:82444200-82452200 Weak transcription Lung lung
46 chr15:82444200-82453600 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr15:82444200-82454400 Weak transcription Aorta Aorta
48 chr15:82444200-82454400 Weak transcription Spleen Spleen
49 chr15:82444400-82447800 Weak transcription Muscle Satellite Cultured Cells --
50 chr15:82444400-82449400 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015