Variant report

Variant	rs61273762
Chromosome Location	chr7:119796996-119796997
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10225178	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10254471	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10265230	0.85[ASN][1000 genomes]
rs12706272	0.80[ASN][1000 genomes]
rs58778277	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62469497	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62469500	0.86[ASN][1000 genomes]
rs62469501	0.86[ASN][1000 genomes]
rs62477431	0.80[ASN][1000 genomes]
rs6961750	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73213448	0.86[ASN][1000 genomes]
rs7777091	0.86[ASN][1000 genomes]
rs7786492	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831113	chr7:119683515-119886277	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:119796200-119797200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr7:119796400-119797000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links