Variant report

Variant	rs7777091
Chromosome Location	chr7:119809612-119809613
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:119809230..119812304-chr7:119814174..119818004,3	K562	blood:

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs10224700	0.83[EUR][1000 genomes]
rs10224809	0.83[EUR][1000 genomes]
rs10269967	0.93[EUR][1000 genomes]
rs10488286	1.00[JPT][hapmap]
rs10953909	1.00[JPT][hapmap]
rs11487122	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11760262	0.83[ASN][1000 genomes]
rs11763966	0.83[ASN][1000 genomes]
rs11767260	0.87[ASN][1000 genomes]
rs11767585	0.83[CHD][hapmap];0.87[GIH][hapmap]
rs11768610	0.87[ASN][1000 genomes]
rs11769340	1.00[JPT][hapmap]
rs11773232	0.83[ASN][1000 genomes]
rs11982510	0.85[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs17142555	0.96[EUR][1000 genomes]
rs17374849	0.83[ASN][1000 genomes]
rs17594101	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17594220	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs28532220	0.96[EUR][1000 genomes]
rs34850246	0.85[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs3735339	0.82[EUR][1000 genomes]
rs55680276	0.83[ASN][1000 genomes]
rs55963403	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs56244901	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58778277	0.86[ASN][1000 genomes]
rs61273762	0.86[ASN][1000 genomes]
rs62469497	0.86[ASN][1000 genomes]
rs62469500	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62469501	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62469503	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62469505	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62469506	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62469507	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62470461	0.83[ASN][1000 genomes]
rs62470532	0.83[ASN][1000 genomes]
rs6466735	0.95[EUR][1000 genomes]
rs6466742	0.85[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs6942451	0.81[ASN][1000 genomes]
rs6942755	0.81[ASN][1000 genomes]
rs6956408	0.96[EUR][1000 genomes]
rs6956570	0.95[EUR][1000 genomes]
rs6956643	0.84[EUR][1000 genomes]
rs6969916	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6973947	0.95[EUR][1000 genomes]
rs6978586	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73213448	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73213458	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7778213	1.00[JPT][hapmap]
rs7781529	0.95[EUR][1000 genomes]
rs7786492	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7792688	0.83[EUR][1000 genomes]
rs7795487	0.81[EUR][1000 genomes]
rs7800545	0.82[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831113	chr7:119683515-119886277	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:119805200-119810800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr7:119807800-119811000	Weak transcription	Colon Smooth Muscle	Colon
3	chr7:119808600-119809800	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr7:119808600-119811400	Weak transcription	Adipose Nuclei	Adipose
5	chr7:119808600-119812400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr7:119808600-119820600	Weak transcription	NHLF	lung
7	chr7:119808800-119810200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr7:119808800-119811600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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