Variant report
Variant | rs62469497 |
---|---|
Chromosome Location | chr7:119800330-119800331 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10225178 | 0.95[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs10237275 | 0.81[EUR][1000 genomes] |
rs10252729 | 0.81[EUR][1000 genomes] |
rs10254471 | 0.95[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs10265230 | 0.85[ASN][1000 genomes] |
rs12706272 | 0.80[ASN][1000 genomes] |
rs17142585 | 0.81[EUR][1000 genomes] |
rs2190183 | 0.81[EUR][1000 genomes] |
rs2190184 | 0.85[EUR][1000 genomes] |
rs58778277 | 0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs60578704 | 0.82[EUR][1000 genomes] |
rs61273762 | 0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62469500 | 0.86[ASN][1000 genomes] |
rs62469501 | 0.86[ASN][1000 genomes] |
rs62477431 | 0.80[ASN][1000 genomes] |
rs6943223 | 0.81[EUR][1000 genomes] |
rs6961750 | 0.95[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6974349 | 0.81[EUR][1000 genomes] |
rs73213448 | 0.86[ASN][1000 genomes] |
rs7777091 | 0.86[ASN][1000 genomes] |
rs7786492 | 0.86[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv831113 | chr7:119683515-119886277 | Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:119800000-119801000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |