Variant report

Variant rs6131201
Chromosome Location chr20:11360115-11360116
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:11350400-11360200 Weak transcription Pancreas Pancrea
2 chr20:11354600-11360200 Weak transcription Spleen Spleen
3 chr20:11358400-11360200 Weak transcription Osteobl bone
4 chr20:11358600-11361000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
5 chr20:11358600-11361200 Enhancers H1 Cell Line embryonic stem cell
6 chr20:11359200-11360200 Weak transcription H9 Cell Line embryonic stem cell
7 chr20:11359200-11361600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr20:11359800-11360400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr20:11359800-11360600 Enhancers Fetal Intestine Small intestine
10 chr20:11359800-11361000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr20:11359800-11361000 Enhancers Esophagus oesophagus
12 chr20:11360000-11360200 Flanking Active TSS HUES48 Cell Line embryonic stem cell
13 chr20:11360000-11360200 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr20:11360000-11360400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr20:11360000-11360400 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr20:11360000-11360400 Flanking Active TSS Fetal Intestine Large intestine
17 chr20:11360000-11360400 Enhancers Psoas Muscle Psoas
18 chr20:11360000-11360400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
19 chr20:11360000-11360400 Flanking Active TSS HepG2 liver
20 chr20:11360000-11360600 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
21 chr20:11360000-11360600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr20:11360000-11360600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
23 chr20:11360000-11360600 Flanking Active TSS Fetal Thymus thymus
24 chr20:11360000-11360600 Enhancers Skeletal Muscle Male skeletal muscle
25 chr20:11360000-11360800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr20:11360000-11360800 Flanking Active TSS HUES64 Cell Line embryonic stem cell
27 chr20:11360000-11360800 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
28 chr20:11360000-11360800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
29 chr20:11360000-11360800 Enhancers Fetal Muscle Trunk muscle
30 chr20:11360000-11360800 Enhancers Fetal Muscle Leg muscle
31 chr20:11360000-11361000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr20:11360000-11361000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr20:11360000-11361000 Flanking Active TSS HUES6 Cell Line embryonic stem cell
34 chr20:11360000-11361000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr20:11360000-11361000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
36 chr20:11360000-11361000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
37 chr20:11360000-11361000 Enhancers Placenta Placenta
38 chr20:11360000-11361200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
39 chr20:11360000-11361800 Enhancers GM12878-XiMat blood

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