Variant report

Variant rs2327404
Chromosome Location chr20:11353417-11353418
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:11335000-11355400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr20:11345400-11360000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr20:11346600-11358600 Weak transcription H9 Cell Line embryonic stem cell
4 chr20:11346800-11360000 Weak transcription Psoas Muscle Psoas
5 chr20:11347800-11356000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr20:11348000-11354400 Weak transcription HMEC breast
7 chr20:11350000-11353800 Weak transcription Right Atrium heart
8 chr20:11350400-11353800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr20:11350400-11353800 Weak transcription Esophagus oesophagus
10 chr20:11350400-11356600 Weak transcription Fetal Kidney kidney
11 chr20:11350400-11360200 Weak transcription Pancreas Pancrea
12 chr20:11350600-11353600 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr20:11351200-11358600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr20:11352000-11355200 Enhancers Cortex derived primary cultured neurospheres brain
15 chr20:11352000-11358800 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr20:11352800-11358600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr20:11353000-11354600 Enhancers Fetal Muscle Leg muscle
18 chr20:11353200-11353600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr20:11353200-11353600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr20:11353200-11353800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
21 chr20:11353200-11354400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr20:11353200-11354600 Enhancers Brain Germinal Matrix brain
23 chr20:11353200-11354800 Enhancers Fetal Brain Male brain
24 chr20:11353400-11353800 Enhancers ES-WA7 Cell Line embryonic stem cell
25 chr20:11353400-11354000 Enhancers HUES6 Cell Line embryonic stem cell
26 chr20:11353400-11354000 Enhancers Placenta Amnion Placenta Amnion
27 chr20:11353400-11354400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
28 chr20:11353400-11354400 Enhancers HUES64 Cell Line embryonic stem cell
29 chr20:11353400-11354400 Enhancers iPS-20b Cell Line embryonic stem cell
30 chr20:11353400-11354600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr20:11353400-11354600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr20:11353400-11354600 Enhancers HSMMtube muscle

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