Variant report

Variant rs2223868
Chromosome Location chr20:11358638-11358639
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:11345400-11360000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr20:11346800-11360000 Weak transcription Psoas Muscle Psoas
3 chr20:11350400-11360200 Weak transcription Pancreas Pancrea
4 chr20:11352000-11358800 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr20:11353600-11359400 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr20:11354200-11358800 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr20:11354400-11358800 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr20:11354400-11358800 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr20:11354400-11358800 Weak transcription Esophagus oesophagus
10 chr20:11354400-11359000 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr20:11354400-11359200 Enhancers HMEC breast
12 chr20:11354400-11359600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr20:11354400-11360000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr20:11354600-11358800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr20:11354600-11359800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr20:11354600-11360000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr20:11354600-11360000 Weak transcription Fetal Muscle Leg muscle
18 chr20:11354600-11360000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr20:11354600-11360200 Weak transcription Spleen Spleen
20 chr20:11355400-11359200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr20:11356000-11358800 Enhancers NHEK skin
22 chr20:11356600-11360000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr20:11357000-11359000 Enhancers Hela-S3 cervix
24 chr20:11357000-11360000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr20:11358000-11360000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr20:11358000-11360000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr20:11358400-11360200 Weak transcription Osteobl bone
28 chr20:11358600-11359200 Enhancers H9 Cell Line embryonic stem cell
29 chr20:11358600-11360000 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr20:11358600-11360000 Enhancers HUES6 Cell Line embryonic stem cell
31 chr20:11358600-11360000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr20:11358600-11361000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
33 chr20:11358600-11361200 Enhancers H1 Cell Line embryonic stem cell

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